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Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region

The Brazilian Amazon Region is a highly endemic area for hepatitis B virus (HBV). However, little is known regarding the genetic variability of the strains circulating in this geographical region. Here, we describe the first full-length genomes of HBV isolated in the Brazilian Amazon Region; these g...

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Autores principales: Spitz, Natália, Mello, Francisco CA, Araujo, Natalia Motta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Instituto Oswaldo Cruz, Ministério da Saúde 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4371232/
https://www.ncbi.nlm.nih.gov/pubmed/25742278
http://dx.doi.org/10.1590/0074-02760140426
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author Spitz, Natália
Mello, Francisco CA
Araujo, Natalia Motta
author_facet Spitz, Natália
Mello, Francisco CA
Araujo, Natalia Motta
author_sort Spitz, Natália
collection PubMed
description The Brazilian Amazon Region is a highly endemic area for hepatitis B virus (HBV). However, little is known regarding the genetic variability of the strains circulating in this geographical region. Here, we describe the first full-length genomes of HBV isolated in the Brazilian Amazon Region; these genomes are also the first complete HBV subgenotype D3 genomes reported for Brazil. The genomes of the five Brazilian isolates were all 3,182 base pairs in length and the isolates were classified as belonging to subgenotype D3, subtypes ayw2 (n = 3) and ayw3 (n = 2). Phylogenetic analysis suggested that the Brazilian sequences are not likely to be closely related to European D3 sequences. Such results will contribute to further epidemiological and evolutionary studies of HBV.
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spelling pubmed-43712322015-03-25 Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region Spitz, Natália Mello, Francisco CA Araujo, Natalia Motta Mem Inst Oswaldo Cruz Genome Announcement and Highlights The Brazilian Amazon Region is a highly endemic area for hepatitis B virus (HBV). However, little is known regarding the genetic variability of the strains circulating in this geographical region. Here, we describe the first full-length genomes of HBV isolated in the Brazilian Amazon Region; these genomes are also the first complete HBV subgenotype D3 genomes reported for Brazil. The genomes of the five Brazilian isolates were all 3,182 base pairs in length and the isolates were classified as belonging to subgenotype D3, subtypes ayw2 (n = 3) and ayw3 (n = 2). Phylogenetic analysis suggested that the Brazilian sequences are not likely to be closely related to European D3 sequences. Such results will contribute to further epidemiological and evolutionary studies of HBV. Instituto Oswaldo Cruz, Ministério da Saúde 2015-02 /pmc/articles/PMC4371232/ /pubmed/25742278 http://dx.doi.org/10.1590/0074-02760140426 Text en http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Announcement and Highlights
Spitz, Natália
Mello, Francisco CA
Araujo, Natalia Motta
Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region
title Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region
title_full Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region
title_fullStr Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region
title_full_unstemmed Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region
title_short Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region
title_sort full-genome sequences of hepatitis b virus subgenotype d3 isolates from the brazilian amazon region
topic Genome Announcement and Highlights
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4371232/
https://www.ncbi.nlm.nih.gov/pubmed/25742278
http://dx.doi.org/10.1590/0074-02760140426
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