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Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region
The Brazilian Amazon Region is a highly endemic area for hepatitis B virus (HBV). However, little is known regarding the genetic variability of the strains circulating in this geographical region. Here, we describe the first full-length genomes of HBV isolated in the Brazilian Amazon Region; these g...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Instituto Oswaldo Cruz, Ministério da Saúde
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4371232/ https://www.ncbi.nlm.nih.gov/pubmed/25742278 http://dx.doi.org/10.1590/0074-02760140426 |
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author | Spitz, Natália Mello, Francisco CA Araujo, Natalia Motta |
author_facet | Spitz, Natália Mello, Francisco CA Araujo, Natalia Motta |
author_sort | Spitz, Natália |
collection | PubMed |
description | The Brazilian Amazon Region is a highly endemic area for hepatitis B virus (HBV). However, little is known regarding the genetic variability of the strains circulating in this geographical region. Here, we describe the first full-length genomes of HBV isolated in the Brazilian Amazon Region; these genomes are also the first complete HBV subgenotype D3 genomes reported for Brazil. The genomes of the five Brazilian isolates were all 3,182 base pairs in length and the isolates were classified as belonging to subgenotype D3, subtypes ayw2 (n = 3) and ayw3 (n = 2). Phylogenetic analysis suggested that the Brazilian sequences are not likely to be closely related to European D3 sequences. Such results will contribute to further epidemiological and evolutionary studies of HBV. |
format | Online Article Text |
id | pubmed-4371232 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Instituto Oswaldo Cruz, Ministério da Saúde |
record_format | MEDLINE/PubMed |
spelling | pubmed-43712322015-03-25 Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region Spitz, Natália Mello, Francisco CA Araujo, Natalia Motta Mem Inst Oswaldo Cruz Genome Announcement and Highlights The Brazilian Amazon Region is a highly endemic area for hepatitis B virus (HBV). However, little is known regarding the genetic variability of the strains circulating in this geographical region. Here, we describe the first full-length genomes of HBV isolated in the Brazilian Amazon Region; these genomes are also the first complete HBV subgenotype D3 genomes reported for Brazil. The genomes of the five Brazilian isolates were all 3,182 base pairs in length and the isolates were classified as belonging to subgenotype D3, subtypes ayw2 (n = 3) and ayw3 (n = 2). Phylogenetic analysis suggested that the Brazilian sequences are not likely to be closely related to European D3 sequences. Such results will contribute to further epidemiological and evolutionary studies of HBV. Instituto Oswaldo Cruz, Ministério da Saúde 2015-02 /pmc/articles/PMC4371232/ /pubmed/25742278 http://dx.doi.org/10.1590/0074-02760140426 Text en http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License, which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Genome Announcement and Highlights Spitz, Natália Mello, Francisco CA Araujo, Natalia Motta Full-genome sequences of hepatitis B virus subgenotype D3 isolates from the Brazilian Amazon Region |
title | Full-genome sequences of hepatitis B virus subgenotype D3 isolates from
the Brazilian Amazon Region |
title_full | Full-genome sequences of hepatitis B virus subgenotype D3 isolates from
the Brazilian Amazon Region |
title_fullStr | Full-genome sequences of hepatitis B virus subgenotype D3 isolates from
the Brazilian Amazon Region |
title_full_unstemmed | Full-genome sequences of hepatitis B virus subgenotype D3 isolates from
the Brazilian Amazon Region |
title_short | Full-genome sequences of hepatitis B virus subgenotype D3 isolates from
the Brazilian Amazon Region |
title_sort | full-genome sequences of hepatitis b virus subgenotype d3 isolates from
the brazilian amazon region |
topic | Genome Announcement and Highlights |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4371232/ https://www.ncbi.nlm.nih.gov/pubmed/25742278 http://dx.doi.org/10.1590/0074-02760140426 |
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