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How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data?
BACKGROUND: A number of imaging factors can affect the orientation distribution function (ODF) reconstruction in high angular resolution diffusion imaging (HARDI). The aim of this study was to investigate the effect of the b-value on the HARDI reconstruction and to seek for the appropriate b-value f...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4372417/ https://www.ncbi.nlm.nih.gov/pubmed/25803023 http://dx.doi.org/10.1371/journal.pone.0120773 |
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author | Xie, Sangma Zuo, Nianming Shang, Liqing Song, Ming Fan, Lingzhong Jiang, Tianzi |
author_facet | Xie, Sangma Zuo, Nianming Shang, Liqing Song, Ming Fan, Lingzhong Jiang, Tianzi |
author_sort | Xie, Sangma |
collection | PubMed |
description | BACKGROUND: A number of imaging factors can affect the orientation distribution function (ODF) reconstruction in high angular resolution diffusion imaging (HARDI). The aim of this study was to investigate the effect of the b-value on the HARDI reconstruction and to seek for the appropriate b-value for ODF reconstruction from clinical HARDI data. METHODS: Diffusion MRI data with various b-values were collected on a GE 3T MRI scanner. To reconstruct the diffusion ODF and fiber ODF, decomposition-based spherical polar Fourier imaging and deconvolution-based constrained spherical deconvolution approaches were applied separately. The full width at half maximum (FWHM) of the ODF and the angular difference of the peaks extracted from ODF were measured to investigate the effect of b-value on the ODF reconstruction. Visual inspection of the ODF was used to evaluate the reconstructions. RESULTS: The FWHM of the ODFs in the corpus callosum, which was chosen as the region of interest (ROI), decreased with increasing b-values. The differences in the FWHM for the diffusion ODF and the fiber ODF between the b-values of 2000 s/mm(2) and 2500 s/mm(2) were not significant. The angular differences of the ODF between 2000 s/mm(2) and 2500 s/mm(2) were lowest in both single-directional and two-directional situations. The ODFs became sharper and crossing-fiber situations were detected with an increase in b-value. B = 2000 s/mm(2) and above revealed most of the two-way or three-way crossing-fiber structures. CONCLUSIONS: Considering both the signal-to-noise ratio and the acquisition time, b = 2000 s/mm(2) is the basic requirement for ODF reconstruction using current HARDI methods on clinical data. This study can provide a useful reference for researchers and clinicians attempting to set appropriate scan protocols for specific HARDI experiments. |
format | Online Article Text |
id | pubmed-4372417 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43724172015-04-04 How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data? Xie, Sangma Zuo, Nianming Shang, Liqing Song, Ming Fan, Lingzhong Jiang, Tianzi PLoS One Research Article BACKGROUND: A number of imaging factors can affect the orientation distribution function (ODF) reconstruction in high angular resolution diffusion imaging (HARDI). The aim of this study was to investigate the effect of the b-value on the HARDI reconstruction and to seek for the appropriate b-value for ODF reconstruction from clinical HARDI data. METHODS: Diffusion MRI data with various b-values were collected on a GE 3T MRI scanner. To reconstruct the diffusion ODF and fiber ODF, decomposition-based spherical polar Fourier imaging and deconvolution-based constrained spherical deconvolution approaches were applied separately. The full width at half maximum (FWHM) of the ODF and the angular difference of the peaks extracted from ODF were measured to investigate the effect of b-value on the ODF reconstruction. Visual inspection of the ODF was used to evaluate the reconstructions. RESULTS: The FWHM of the ODFs in the corpus callosum, which was chosen as the region of interest (ROI), decreased with increasing b-values. The differences in the FWHM for the diffusion ODF and the fiber ODF between the b-values of 2000 s/mm(2) and 2500 s/mm(2) were not significant. The angular differences of the ODF between 2000 s/mm(2) and 2500 s/mm(2) were lowest in both single-directional and two-directional situations. The ODFs became sharper and crossing-fiber situations were detected with an increase in b-value. B = 2000 s/mm(2) and above revealed most of the two-way or three-way crossing-fiber structures. CONCLUSIONS: Considering both the signal-to-noise ratio and the acquisition time, b = 2000 s/mm(2) is the basic requirement for ODF reconstruction using current HARDI methods on clinical data. This study can provide a useful reference for researchers and clinicians attempting to set appropriate scan protocols for specific HARDI experiments. Public Library of Science 2015-03-24 /pmc/articles/PMC4372417/ /pubmed/25803023 http://dx.doi.org/10.1371/journal.pone.0120773 Text en © 2015 Xie et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Xie, Sangma Zuo, Nianming Shang, Liqing Song, Ming Fan, Lingzhong Jiang, Tianzi How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data? |
title | How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data? |
title_full | How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data? |
title_fullStr | How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data? |
title_full_unstemmed | How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data? |
title_short | How Does B-Value Affect HARDI Reconstruction Using Clinical Diffusion MRI Data? |
title_sort | how does b-value affect hardi reconstruction using clinical diffusion mri data? |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4372417/ https://www.ncbi.nlm.nih.gov/pubmed/25803023 http://dx.doi.org/10.1371/journal.pone.0120773 |
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