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ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae
Recently, different dehydration-based technologies have been evaluated for the purpose of cell and tissue preservation. Although some early results have been promising, they have not satisfied the requirements for large-scale applications. The long experience of using quantitative trait loci (QTLs)...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4372426/ https://www.ncbi.nlm.nih.gov/pubmed/25803831 http://dx.doi.org/10.1371/journal.pone.0119606 |
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author | López-Martínez, Gema Margalef-Català, Mar Salinas, Francisco Liti, Gianni Cordero-Otero, Ricardo |
author_facet | López-Martínez, Gema Margalef-Català, Mar Salinas, Francisco Liti, Gianni Cordero-Otero, Ricardo |
author_sort | López-Martínez, Gema |
collection | PubMed |
description | Recently, different dehydration-based technologies have been evaluated for the purpose of cell and tissue preservation. Although some early results have been promising, they have not satisfied the requirements for large-scale applications. The long experience of using quantitative trait loci (QTLs) with the yeast Saccharomyces cerevisiae has proven to be a good model organism for studying the link between complex phenotypes and DNA variations. Here, we use QTL analysis as a tool for identifying the specific yeast traits involved in dehydration stress tolerance. Three hybrids obtained from stable haploids and sequenced in the Saccharomyces Genome Resequencing Project showed intermediate dehydration tolerance in most cases. The dehydration resistance trait of 96 segregants from each hybrid was quantified. A smooth, continuous distribution of the anhydrobiosis tolerance trait was found, suggesting that this trait is determined by multiple QTLs. Therefore, we carried out a QTL analysis to identify the determinants of this dehydration tolerance trait at the genomic level. Among the genes identified after reciprocal hemizygosity assays, RSM22, ATG18 and DBR1 had not been referenced in previous studies. We report new phenotypes for these genes using a previously validated test. Finally, our data illustrates the power of this approach in the investigation of the complex cell dehydration phenotype. |
format | Online Article Text |
id | pubmed-4372426 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43724262015-04-04 ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae López-Martínez, Gema Margalef-Català, Mar Salinas, Francisco Liti, Gianni Cordero-Otero, Ricardo PLoS One Research Article Recently, different dehydration-based technologies have been evaluated for the purpose of cell and tissue preservation. Although some early results have been promising, they have not satisfied the requirements for large-scale applications. The long experience of using quantitative trait loci (QTLs) with the yeast Saccharomyces cerevisiae has proven to be a good model organism for studying the link between complex phenotypes and DNA variations. Here, we use QTL analysis as a tool for identifying the specific yeast traits involved in dehydration stress tolerance. Three hybrids obtained from stable haploids and sequenced in the Saccharomyces Genome Resequencing Project showed intermediate dehydration tolerance in most cases. The dehydration resistance trait of 96 segregants from each hybrid was quantified. A smooth, continuous distribution of the anhydrobiosis tolerance trait was found, suggesting that this trait is determined by multiple QTLs. Therefore, we carried out a QTL analysis to identify the determinants of this dehydration tolerance trait at the genomic level. Among the genes identified after reciprocal hemizygosity assays, RSM22, ATG18 and DBR1 had not been referenced in previous studies. We report new phenotypes for these genes using a previously validated test. Finally, our data illustrates the power of this approach in the investigation of the complex cell dehydration phenotype. Public Library of Science 2015-03-24 /pmc/articles/PMC4372426/ /pubmed/25803831 http://dx.doi.org/10.1371/journal.pone.0119606 Text en © 2015 López-Martínez et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article López-Martínez, Gema Margalef-Català, Mar Salinas, Francisco Liti, Gianni Cordero-Otero, Ricardo ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae |
title |
ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae
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title_full |
ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae
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title_fullStr |
ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae
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title_full_unstemmed |
ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae
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title_short |
ATG18 and FAB1 Are Involved in Dehydration Stress Tolerance in Saccharomyces cerevisiae
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title_sort | atg18 and fab1 are involved in dehydration stress tolerance in saccharomyces cerevisiae |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4372426/ https://www.ncbi.nlm.nih.gov/pubmed/25803831 http://dx.doi.org/10.1371/journal.pone.0119606 |
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