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Multivariate Analysis for Animal Selection in Experimental Research

BACKGROUND: Several researchers seek methods for the selection of homogeneous groups of animals in experimental studies, a fact justified because homogeneity is an indispensable prerequisite for casualization of treatments. The lack of robust methods that comply with statistical and biological princ...

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Autores principales: Pinto, Renan Mercuri, de Campos, Dijon Henrique Salomé, Tomasi, Loreta Casquel, Cicogna, Antonio Carlos, Okoshi, Katashi, Padovani, Carlos Roberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Cardiologia 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375652/
https://www.ncbi.nlm.nih.gov/pubmed/25651342
http://dx.doi.org/10.5935/abc.20140219
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author Pinto, Renan Mercuri
de Campos, Dijon Henrique Salomé
Tomasi, Loreta Casquel
Cicogna, Antonio Carlos
Okoshi, Katashi
Padovani, Carlos Roberto
author_facet Pinto, Renan Mercuri
de Campos, Dijon Henrique Salomé
Tomasi, Loreta Casquel
Cicogna, Antonio Carlos
Okoshi, Katashi
Padovani, Carlos Roberto
author_sort Pinto, Renan Mercuri
collection PubMed
description BACKGROUND: Several researchers seek methods for the selection of homogeneous groups of animals in experimental studies, a fact justified because homogeneity is an indispensable prerequisite for casualization of treatments. The lack of robust methods that comply with statistical and biological principles is the reason why researchers use empirical or subjective methods, influencing their results. OBJECTIVE: To develop a multivariate statistical model for the selection of a homogeneous group of animals for experimental research and to elaborate a computational package to use it. METHODS: The set of echocardiographic data of 115 male Wistar rats with supravalvular aortic stenosis (AoS) was used as an example of model development. Initially, the data were standardized, and became dimensionless. Then, the variance matrix of the set was submitted to principal components analysis (PCA), aiming at reducing the parametric space and at retaining the relevant variability. That technique established a new Cartesian system into which the animals were allocated, and finally the confidence region (ellipsoid) was built for the profile of the animals’ homogeneous responses. The animals located inside the ellipsoid were considered as belonging to the homogeneous batch; those outside the ellipsoid were considered spurious. RESULTS: The PCA established eight descriptive axes that represented the accumulated variance of the data set in 88.71%. The allocation of the animals in the new system and the construction of the confidence region revealed six spurious animals as compared to the homogeneous batch of 109 animals. CONCLUSION: The biometric criterion presented proved to be effective, because it considers the animal as a whole, analyzing jointly all parameters measured, in addition to having a small discard rate.
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spelling pubmed-43756522015-03-30 Multivariate Analysis for Animal Selection in Experimental Research Pinto, Renan Mercuri de Campos, Dijon Henrique Salomé Tomasi, Loreta Casquel Cicogna, Antonio Carlos Okoshi, Katashi Padovani, Carlos Roberto Arq Bras Cardiol Special Article BACKGROUND: Several researchers seek methods for the selection of homogeneous groups of animals in experimental studies, a fact justified because homogeneity is an indispensable prerequisite for casualization of treatments. The lack of robust methods that comply with statistical and biological principles is the reason why researchers use empirical or subjective methods, influencing their results. OBJECTIVE: To develop a multivariate statistical model for the selection of a homogeneous group of animals for experimental research and to elaborate a computational package to use it. METHODS: The set of echocardiographic data of 115 male Wistar rats with supravalvular aortic stenosis (AoS) was used as an example of model development. Initially, the data were standardized, and became dimensionless. Then, the variance matrix of the set was submitted to principal components analysis (PCA), aiming at reducing the parametric space and at retaining the relevant variability. That technique established a new Cartesian system into which the animals were allocated, and finally the confidence region (ellipsoid) was built for the profile of the animals’ homogeneous responses. The animals located inside the ellipsoid were considered as belonging to the homogeneous batch; those outside the ellipsoid were considered spurious. RESULTS: The PCA established eight descriptive axes that represented the accumulated variance of the data set in 88.71%. The allocation of the animals in the new system and the construction of the confidence region revealed six spurious animals as compared to the homogeneous batch of 109 animals. CONCLUSION: The biometric criterion presented proved to be effective, because it considers the animal as a whole, analyzing jointly all parameters measured, in addition to having a small discard rate. Sociedade Brasileira de Cardiologia 2015-02 /pmc/articles/PMC4375652/ /pubmed/25651342 http://dx.doi.org/10.5935/abc.20140219 Text en http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Special Article
Pinto, Renan Mercuri
de Campos, Dijon Henrique Salomé
Tomasi, Loreta Casquel
Cicogna, Antonio Carlos
Okoshi, Katashi
Padovani, Carlos Roberto
Multivariate Analysis for Animal Selection in Experimental Research
title Multivariate Analysis for Animal Selection in Experimental Research
title_full Multivariate Analysis for Animal Selection in Experimental Research
title_fullStr Multivariate Analysis for Animal Selection in Experimental Research
title_full_unstemmed Multivariate Analysis for Animal Selection in Experimental Research
title_short Multivariate Analysis for Animal Selection in Experimental Research
title_sort multivariate analysis for animal selection in experimental research
topic Special Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375652/
https://www.ncbi.nlm.nih.gov/pubmed/25651342
http://dx.doi.org/10.5935/abc.20140219
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