Cargando…

An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides

Earthworms are important organisms in soil communities and so are used as model organisms in environmental risk assessments of chemicals. However current risk assessments of soil invertebrates are based on short-term laboratory studies, of limited ecological relevance, supplemented if necessary by s...

Descripción completa

Detalles Bibliográficos
Autores principales: Johnston, A.S.A., Hodson, M.E., Thorbek, P., Alvarez, T., Sibly, R.M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier] 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375675/
https://www.ncbi.nlm.nih.gov/pubmed/25844009
http://dx.doi.org/10.1016/j.ecolmodel.2013.09.012
_version_ 1782363614800248832
author Johnston, A.S.A.
Hodson, M.E.
Thorbek, P.
Alvarez, T.
Sibly, R.M.
author_facet Johnston, A.S.A.
Hodson, M.E.
Thorbek, P.
Alvarez, T.
Sibly, R.M.
author_sort Johnston, A.S.A.
collection PubMed
description Earthworms are important organisms in soil communities and so are used as model organisms in environmental risk assessments of chemicals. However current risk assessments of soil invertebrates are based on short-term laboratory studies, of limited ecological relevance, supplemented if necessary by site-specific field trials, which sometimes are challenging to apply across the whole agricultural landscape. Here, we investigate whether population responses to environmental stressors and pesticide exposure can be accurately predicted by combining energy budget and agent-based models (ABMs), based on knowledge of how individuals respond to their local circumstances. A simple energy budget model was implemented within each earthworm Eisenia fetida in the ABM, based on a priori parameter estimates. From broadly accepted physiological principles, simple algorithms specify how energy acquisition and expenditure drive life cycle processes. Each individual allocates energy between maintenance, growth and/or reproduction under varying conditions of food density, soil temperature and soil moisture. When simulating published experiments, good model fits were obtained to experimental data on individual growth, reproduction and starvation. Using the energy budget model as a platform we developed methods to identify which of the physiological parameters in the energy budget model (rates of ingestion, maintenance, growth or reproduction) are primarily affected by pesticide applications, producing four hypotheses about how toxicity acts. We tested these hypotheses by comparing model outputs with published toxicity data on the effects of copper oxychloride and chlorpyrifos on E. fetida. Both growth and reproduction were directly affected in experiments in which sufficient food was provided, whilst maintenance was targeted under food limitation. Although we only incorporate toxic effects at the individual level we show how ABMs can readily extrapolate to larger scales by providing good model fits to field population data. The ability of the presented model to fit the available field and laboratory data for E. fetida demonstrates the promise of the agent-based approach in ecology, by showing how biological knowledge can be used to make ecological inferences. Further work is required to extend the approach to populations of more ecologically relevant species studied at the field scale. Such a model could help extrapolate from laboratory to field conditions and from one set of field conditions to another or from species to species.
format Online
Article
Text
id pubmed-4375675
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Elsevier]
record_format MEDLINE/PubMed
spelling pubmed-43756752015-04-01 An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides Johnston, A.S.A. Hodson, M.E. Thorbek, P. Alvarez, T. Sibly, R.M. Ecol Modell Article Earthworms are important organisms in soil communities and so are used as model organisms in environmental risk assessments of chemicals. However current risk assessments of soil invertebrates are based on short-term laboratory studies, of limited ecological relevance, supplemented if necessary by site-specific field trials, which sometimes are challenging to apply across the whole agricultural landscape. Here, we investigate whether population responses to environmental stressors and pesticide exposure can be accurately predicted by combining energy budget and agent-based models (ABMs), based on knowledge of how individuals respond to their local circumstances. A simple energy budget model was implemented within each earthworm Eisenia fetida in the ABM, based on a priori parameter estimates. From broadly accepted physiological principles, simple algorithms specify how energy acquisition and expenditure drive life cycle processes. Each individual allocates energy between maintenance, growth and/or reproduction under varying conditions of food density, soil temperature and soil moisture. When simulating published experiments, good model fits were obtained to experimental data on individual growth, reproduction and starvation. Using the energy budget model as a platform we developed methods to identify which of the physiological parameters in the energy budget model (rates of ingestion, maintenance, growth or reproduction) are primarily affected by pesticide applications, producing four hypotheses about how toxicity acts. We tested these hypotheses by comparing model outputs with published toxicity data on the effects of copper oxychloride and chlorpyrifos on E. fetida. Both growth and reproduction were directly affected in experiments in which sufficient food was provided, whilst maintenance was targeted under food limitation. Although we only incorporate toxic effects at the individual level we show how ABMs can readily extrapolate to larger scales by providing good model fits to field population data. The ability of the presented model to fit the available field and laboratory data for E. fetida demonstrates the promise of the agent-based approach in ecology, by showing how biological knowledge can be used to make ecological inferences. Further work is required to extend the approach to populations of more ecologically relevant species studied at the field scale. Such a model could help extrapolate from laboratory to field conditions and from one set of field conditions to another or from species to species. Elsevier] 2014-05-24 /pmc/articles/PMC4375675/ /pubmed/25844009 http://dx.doi.org/10.1016/j.ecolmodel.2013.09.012 Text en © 2013 Published by Elsevier B.V. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Johnston, A.S.A.
Hodson, M.E.
Thorbek, P.
Alvarez, T.
Sibly, R.M.
An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides
title An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides
title_full An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides
title_fullStr An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides
title_full_unstemmed An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides
title_short An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides
title_sort energy budget agent-based model of earthworm populations and its application to study the effects of pesticides
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4375675/
https://www.ncbi.nlm.nih.gov/pubmed/25844009
http://dx.doi.org/10.1016/j.ecolmodel.2013.09.012
work_keys_str_mv AT johnstonasa anenergybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT hodsonme anenergybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT thorbekp anenergybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT alvarezt anenergybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT siblyrm anenergybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT johnstonasa energybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT hodsonme energybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT thorbekp energybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT alvarezt energybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides
AT siblyrm energybudgetagentbasedmodelofearthwormpopulationsanditsapplicationtostudytheeffectsofpesticides