Cargando…
Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions
BACKGROUND: Chemoreception is based on the senses of smell and taste that are crucial for animals to find new food sources, shelter, and mates. The initial step in olfaction involves the translocation of odorants from the periphery through the aqueous lymph of the olfactory sensilla to the odorant r...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4377858/ https://www.ncbi.nlm.nih.gov/pubmed/25523483 http://dx.doi.org/10.1186/1471-2164-15-1141 |
_version_ | 1782363972657217536 |
---|---|
author | Dippel, Stefan Oberhofer, Georg Kahnt, Jörg Gerischer, Lizzy Opitz, Lennart Schachtner, Joachim Stanke, Mario Schütz, Stefan Wimmer, Ernst A Angeli, Sergio |
author_facet | Dippel, Stefan Oberhofer, Georg Kahnt, Jörg Gerischer, Lizzy Opitz, Lennart Schachtner, Joachim Stanke, Mario Schütz, Stefan Wimmer, Ernst A Angeli, Sergio |
author_sort | Dippel, Stefan |
collection | PubMed |
description | BACKGROUND: Chemoreception is based on the senses of smell and taste that are crucial for animals to find new food sources, shelter, and mates. The initial step in olfaction involves the translocation of odorants from the periphery through the aqueous lymph of the olfactory sensilla to the odorant receptors most likely by chemosensory proteins (CSPs) or odorant binding proteins (OBPs). RESULTS: To better understand the roles of CSPs and OBPs in a coleopteran pest species, the red flour beetle Tribolium castaneum (Coleoptera, Tenebrionidae), we performed transcriptome analyses of male and female antennae, heads, mouthparts, legs, and bodies, which revealed that all 20 CSPs and 49 of the 50 previously annotated OBPs are transcribed. Only six of the 20 CSP are significantly transcriptionally enriched in the main chemosensory tissues (antenna and/or mouthparts), whereas of the OBPs all eight members of the antenna binding proteins II (ABPII) subgroup, 18 of the 20 classic OBP subgroup, the C + OBP, and only five of the 21 C-OBPs show increased chemosensory tissue expression. By MALDI-TOF-TOF MS protein fingerprinting, we confirmed three CSPs, four ABPIIs, three classic OBPs, and four C-OBPs in the antennae. CONCLUSIONS: Most of the classic OBPs and all ABPIIs are likely involved in chemoreception. A few are also present in other tissues such as odoriferous glands and testes and may be involved in release or transfer of chemical signals. The majority of the CSPs as well as the C-OBPs are not enriched in antennae or mouthparts, suggesting a more general role in the transport of hydrophobic molecules. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2164-15-1141) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4377858 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-43778582015-03-31 Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions Dippel, Stefan Oberhofer, Georg Kahnt, Jörg Gerischer, Lizzy Opitz, Lennart Schachtner, Joachim Stanke, Mario Schütz, Stefan Wimmer, Ernst A Angeli, Sergio BMC Genomics Research Article BACKGROUND: Chemoreception is based on the senses of smell and taste that are crucial for animals to find new food sources, shelter, and mates. The initial step in olfaction involves the translocation of odorants from the periphery through the aqueous lymph of the olfactory sensilla to the odorant receptors most likely by chemosensory proteins (CSPs) or odorant binding proteins (OBPs). RESULTS: To better understand the roles of CSPs and OBPs in a coleopteran pest species, the red flour beetle Tribolium castaneum (Coleoptera, Tenebrionidae), we performed transcriptome analyses of male and female antennae, heads, mouthparts, legs, and bodies, which revealed that all 20 CSPs and 49 of the 50 previously annotated OBPs are transcribed. Only six of the 20 CSP are significantly transcriptionally enriched in the main chemosensory tissues (antenna and/or mouthparts), whereas of the OBPs all eight members of the antenna binding proteins II (ABPII) subgroup, 18 of the 20 classic OBP subgroup, the C + OBP, and only five of the 21 C-OBPs show increased chemosensory tissue expression. By MALDI-TOF-TOF MS protein fingerprinting, we confirmed three CSPs, four ABPIIs, three classic OBPs, and four C-OBPs in the antennae. CONCLUSIONS: Most of the classic OBPs and all ABPIIs are likely involved in chemoreception. A few are also present in other tissues such as odoriferous glands and testes and may be involved in release or transfer of chemical signals. The majority of the CSPs as well as the C-OBPs are not enriched in antennae or mouthparts, suggesting a more general role in the transport of hydrophobic molecules. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2164-15-1141) contains supplementary material, which is available to authorized users. BioMed Central 2014-12-18 /pmc/articles/PMC4377858/ /pubmed/25523483 http://dx.doi.org/10.1186/1471-2164-15-1141 Text en © Dippel et al.; licensee BioMed Central. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Dippel, Stefan Oberhofer, Georg Kahnt, Jörg Gerischer, Lizzy Opitz, Lennart Schachtner, Joachim Stanke, Mario Schütz, Stefan Wimmer, Ernst A Angeli, Sergio Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions |
title | Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions |
title_full | Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions |
title_fullStr | Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions |
title_full_unstemmed | Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions |
title_short | Tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle Tribolium castaneum reveal subgroup specificities for olfaction or more general functions |
title_sort | tissue-specific transcriptomics, chromosomal localization, and phylogeny of chemosensory and odorant binding proteins from the red flour beetle tribolium castaneum reveal subgroup specificities for olfaction or more general functions |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4377858/ https://www.ncbi.nlm.nih.gov/pubmed/25523483 http://dx.doi.org/10.1186/1471-2164-15-1141 |
work_keys_str_mv | AT dippelstefan tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT oberhofergeorg tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT kahntjorg tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT gerischerlizzy tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT opitzlennart tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT schachtnerjoachim tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT stankemario tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT schutzstefan tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT wimmerernsta tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions AT angelisergio tissuespecifictranscriptomicschromosomallocalizationandphylogenyofchemosensoryandodorantbindingproteinsfromtheredflourbeetletriboliumcastaneumrevealsubgroupspecificitiesforolfactionormoregeneralfunctions |