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Segmentation of bones in magnetic resonance images of the wrist
PURPOSE: Rheumatoid arthritis (RA) is a disease characterized by progressive and irreversible destruction of bones and joints. According to current recommendations, magnetic resonance imaging (MRI) is used to asses three main signs of RA based on manual evaluation of MR images: synovitis, bone ede...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4379414/ https://www.ncbi.nlm.nih.gov/pubmed/25096983 http://dx.doi.org/10.1007/s11548-014-1105-x |
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author | Włodarczyk, Justyna Czaplicka, Kamila Tabor, Zbisław Wojciechowski, Wadim Urbanik, Andrzej |
author_facet | Włodarczyk, Justyna Czaplicka, Kamila Tabor, Zbisław Wojciechowski, Wadim Urbanik, Andrzej |
author_sort | Włodarczyk, Justyna |
collection | PubMed |
description | PURPOSE: Rheumatoid arthritis (RA) is a disease characterized by progressive and irreversible destruction of bones and joints. According to current recommendations, magnetic resonance imaging (MRI) is used to asses three main signs of RA based on manual evaluation of MR images: synovitis, bone edema and bone erosions. The key feature of a future computer-assisted diagnostic system for evaluation RA lesions is accurate segmentation of 15 wrist bones. In the present paper, we focus on developing a wrist bones segmentation framework. METHOD: The segmentation procedure consisted of three stages: segmentation of the distal parts of ulna and radius, segmentation of the proximal parts of metacarpal bones and segmentation of carpal bones. At every stage, markers of bones were determined first, using an atlas-based approach. Then, given markers of bones and a marker of background, a watershed from markers algorithm was applied to find the final segmentation. RESULTS: The MR data for 37 cases were analyzed. The automated segmentation results were compared with gold-standard manual segmentations using a few well-established metrics: area under ROC curve AUC, mean similarity MS and mean absolute distance MAD. The mean (standard deviation) values of AUC, MS and MAD were 0.97 (0.04), 0.93 (0.09) and 1.23 (0.28), respectively. CONCLUSION: The results of the present study demonstrate that automated segmentation of wrist bones is feasible. The proposed algorithm can be the first stage for the detection of early lesions like bone edema or synovitis. |
format | Online Article Text |
id | pubmed-4379414 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-43794142015-04-07 Segmentation of bones in magnetic resonance images of the wrist Włodarczyk, Justyna Czaplicka, Kamila Tabor, Zbisław Wojciechowski, Wadim Urbanik, Andrzej Int J Comput Assist Radiol Surg Original Article PURPOSE: Rheumatoid arthritis (RA) is a disease characterized by progressive and irreversible destruction of bones and joints. According to current recommendations, magnetic resonance imaging (MRI) is used to asses three main signs of RA based on manual evaluation of MR images: synovitis, bone edema and bone erosions. The key feature of a future computer-assisted diagnostic system for evaluation RA lesions is accurate segmentation of 15 wrist bones. In the present paper, we focus on developing a wrist bones segmentation framework. METHOD: The segmentation procedure consisted of three stages: segmentation of the distal parts of ulna and radius, segmentation of the proximal parts of metacarpal bones and segmentation of carpal bones. At every stage, markers of bones were determined first, using an atlas-based approach. Then, given markers of bones and a marker of background, a watershed from markers algorithm was applied to find the final segmentation. RESULTS: The MR data for 37 cases were analyzed. The automated segmentation results were compared with gold-standard manual segmentations using a few well-established metrics: area under ROC curve AUC, mean similarity MS and mean absolute distance MAD. The mean (standard deviation) values of AUC, MS and MAD were 0.97 (0.04), 0.93 (0.09) and 1.23 (0.28), respectively. CONCLUSION: The results of the present study demonstrate that automated segmentation of wrist bones is feasible. The proposed algorithm can be the first stage for the detection of early lesions like bone edema or synovitis. Springer Berlin Heidelberg 2014-08-06 2015 /pmc/articles/PMC4379414/ /pubmed/25096983 http://dx.doi.org/10.1007/s11548-014-1105-x Text en © The Author(s) 2014 https://creativecommons.org/licenses/by/4.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Original Article Włodarczyk, Justyna Czaplicka, Kamila Tabor, Zbisław Wojciechowski, Wadim Urbanik, Andrzej Segmentation of bones in magnetic resonance images of the wrist |
title | Segmentation of bones in magnetic resonance images of the wrist |
title_full | Segmentation of bones in magnetic resonance images of the wrist |
title_fullStr | Segmentation of bones in magnetic resonance images of the wrist |
title_full_unstemmed | Segmentation of bones in magnetic resonance images of the wrist |
title_short | Segmentation of bones in magnetic resonance images of the wrist |
title_sort | segmentation of bones in magnetic resonance images of the wrist |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4379414/ https://www.ncbi.nlm.nih.gov/pubmed/25096983 http://dx.doi.org/10.1007/s11548-014-1105-x |
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