Cargando…
A Case Study of the Mechanism of Alcohol-Mediated Morita Baylis–Hillman Reactions. The Importance of Experimental Observations
[Image: see text] The mechanism of the Morita Baylis–Hillman reaction has been heavily studied in the literature, and a long series of computational studies have defined complete theoretical energy profiles in these reactions. We employ here a combination of mechanistic probes, including the observa...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2015
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4379969/ https://www.ncbi.nlm.nih.gov/pubmed/25714789 http://dx.doi.org/10.1021/ja5111392 |
_version_ | 1782364268954386432 |
---|---|
author | Plata, R. Erik Singleton, Daniel A. |
author_facet | Plata, R. Erik Singleton, Daniel A. |
author_sort | Plata, R. Erik |
collection | PubMed |
description | [Image: see text] The mechanism of the Morita Baylis–Hillman reaction has been heavily studied in the literature, and a long series of computational studies have defined complete theoretical energy profiles in these reactions. We employ here a combination of mechanistic probes, including the observation of intermediates, the independent generation and partitioning of intermediates, thermodynamic and kinetic measurements on the main reaction and side reactions, isotopic incorporation from solvent, and kinetic isotope effects, to define the mechanism and an experimental mechanistic free-energy profile for a prototypical Morita Baylis–Hillman reaction in methanol. The results are then used to critically evaluate the ability of computations to predict the mechanism. The most notable prediction of the many computational studies, that of a proton-shuttle pathway, is refuted in favor of a simple but computationally intractable acid–base mechanism. Computational predictions vary vastly, and it is not clear that any significant accurate information that was not already apparent from experiment could have been garnered from computations. With care, entropy calculations are only a minor contributor to the larger computational error, while literature entropy-correction processes lead to absurd free-energy predictions. The computations aid in interpreting observations but fail utterly as a replacement for experiment. |
format | Online Article Text |
id | pubmed-4379969 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-43799692016-02-25 A Case Study of the Mechanism of Alcohol-Mediated Morita Baylis–Hillman Reactions. The Importance of Experimental Observations Plata, R. Erik Singleton, Daniel A. J Am Chem Soc [Image: see text] The mechanism of the Morita Baylis–Hillman reaction has been heavily studied in the literature, and a long series of computational studies have defined complete theoretical energy profiles in these reactions. We employ here a combination of mechanistic probes, including the observation of intermediates, the independent generation and partitioning of intermediates, thermodynamic and kinetic measurements on the main reaction and side reactions, isotopic incorporation from solvent, and kinetic isotope effects, to define the mechanism and an experimental mechanistic free-energy profile for a prototypical Morita Baylis–Hillman reaction in methanol. The results are then used to critically evaluate the ability of computations to predict the mechanism. The most notable prediction of the many computational studies, that of a proton-shuttle pathway, is refuted in favor of a simple but computationally intractable acid–base mechanism. Computational predictions vary vastly, and it is not clear that any significant accurate information that was not already apparent from experiment could have been garnered from computations. With care, entropy calculations are only a minor contributor to the larger computational error, while literature entropy-correction processes lead to absurd free-energy predictions. The computations aid in interpreting observations but fail utterly as a replacement for experiment. American Chemical Society 2015-02-25 2015-03-25 /pmc/articles/PMC4379969/ /pubmed/25714789 http://dx.doi.org/10.1021/ja5111392 Text en Copyright © 2015 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Plata, R. Erik Singleton, Daniel A. A Case Study of the Mechanism of Alcohol-Mediated Morita Baylis–Hillman Reactions. The Importance of Experimental Observations |
title | A Case
Study of the Mechanism of Alcohol-Mediated
Morita Baylis–Hillman Reactions. The Importance of Experimental
Observations |
title_full | A Case
Study of the Mechanism of Alcohol-Mediated
Morita Baylis–Hillman Reactions. The Importance of Experimental
Observations |
title_fullStr | A Case
Study of the Mechanism of Alcohol-Mediated
Morita Baylis–Hillman Reactions. The Importance of Experimental
Observations |
title_full_unstemmed | A Case
Study of the Mechanism of Alcohol-Mediated
Morita Baylis–Hillman Reactions. The Importance of Experimental
Observations |
title_short | A Case
Study of the Mechanism of Alcohol-Mediated
Morita Baylis–Hillman Reactions. The Importance of Experimental
Observations |
title_sort | case
study of the mechanism of alcohol-mediated
morita baylis–hillman reactions. the importance of experimental
observations |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4379969/ https://www.ncbi.nlm.nih.gov/pubmed/25714789 http://dx.doi.org/10.1021/ja5111392 |
work_keys_str_mv | AT platarerik acasestudyofthemechanismofalcoholmediatedmoritabaylishillmanreactionstheimportanceofexperimentalobservations AT singletondaniela acasestudyofthemechanismofalcoholmediatedmoritabaylishillmanreactionstheimportanceofexperimentalobservations AT platarerik casestudyofthemechanismofalcoholmediatedmoritabaylishillmanreactionstheimportanceofexperimentalobservations AT singletondaniela casestudyofthemechanismofalcoholmediatedmoritabaylishillmanreactionstheimportanceofexperimentalobservations |