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Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA

Stabilization of the ribosomal complexes plays an important role in translational control. Mechanisms of ribosome stabilization have been studied in detail for initiation and elongation of eukaryotic translation, but almost nothing is known about stabilization of eukaryotic termination ribosomal com...

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Autores principales: Susorov, Denis, Mikhailova, Tatiana, Ivanov, Alexander, Sokolova, Elizaveta, Alkalaeva, Elena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
RNA
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4381076/
https://www.ncbi.nlm.nih.gov/pubmed/25753665
http://dx.doi.org/10.1093/nar/gkv171
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author Susorov, Denis
Mikhailova, Tatiana
Ivanov, Alexander
Sokolova, Elizaveta
Alkalaeva, Elena
author_facet Susorov, Denis
Mikhailova, Tatiana
Ivanov, Alexander
Sokolova, Elizaveta
Alkalaeva, Elena
author_sort Susorov, Denis
collection PubMed
description Stabilization of the ribosomal complexes plays an important role in translational control. Mechanisms of ribosome stabilization have been studied in detail for initiation and elongation of eukaryotic translation, but almost nothing is known about stabilization of eukaryotic termination ribosomal complexes. Here, we present one of the mechanisms of fine-tuning of the translation termination process in eukaryotes. We show that certain deacylated tRNAs, remaining in the E site of the ribosome at the end of the elongation cycle, increase the stability of the termination and posttermination complexes. Moreover, only the part of eRF1 recognizing the stop codon is stabilized in the A site of the ribosome, and the stabilization is not dependent on the hydrolysis of peptidyl-tRNA. The determinants, defining this property of the tRNA, reside in the acceptor stem. It was demonstrated by site-directed mutagenesis of tRNA(Val) and construction of a mini-helix structure identical to the acceptor stem of tRNA. The mechanism of this stabilization is different from the fixation of the unrotated state of the ribosome by CCA end of tRNA or by cycloheximide in the E site. Our data allow to reveal the possible functions of the isodecoder tRNAs in eukaryotes.
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spelling pubmed-43810762015-04-03 Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA Susorov, Denis Mikhailova, Tatiana Ivanov, Alexander Sokolova, Elizaveta Alkalaeva, Elena Nucleic Acids Res RNA Stabilization of the ribosomal complexes plays an important role in translational control. Mechanisms of ribosome stabilization have been studied in detail for initiation and elongation of eukaryotic translation, but almost nothing is known about stabilization of eukaryotic termination ribosomal complexes. Here, we present one of the mechanisms of fine-tuning of the translation termination process in eukaryotes. We show that certain deacylated tRNAs, remaining in the E site of the ribosome at the end of the elongation cycle, increase the stability of the termination and posttermination complexes. Moreover, only the part of eRF1 recognizing the stop codon is stabilized in the A site of the ribosome, and the stabilization is not dependent on the hydrolysis of peptidyl-tRNA. The determinants, defining this property of the tRNA, reside in the acceptor stem. It was demonstrated by site-directed mutagenesis of tRNA(Val) and construction of a mini-helix structure identical to the acceptor stem of tRNA. The mechanism of this stabilization is different from the fixation of the unrotated state of the ribosome by CCA end of tRNA or by cycloheximide in the E site. Our data allow to reveal the possible functions of the isodecoder tRNAs in eukaryotes. Oxford University Press 2015-03-31 2015-03-09 /pmc/articles/PMC4381076/ /pubmed/25753665 http://dx.doi.org/10.1093/nar/gkv171 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle RNA
Susorov, Denis
Mikhailova, Tatiana
Ivanov, Alexander
Sokolova, Elizaveta
Alkalaeva, Elena
Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA
title Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA
title_full Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA
title_fullStr Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA
title_full_unstemmed Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA
title_short Stabilization of eukaryotic ribosomal termination complexes by deacylated tRNA
title_sort stabilization of eukaryotic ribosomal termination complexes by deacylated trna
topic RNA
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4381076/
https://www.ncbi.nlm.nih.gov/pubmed/25753665
http://dx.doi.org/10.1093/nar/gkv171
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