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High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART)

Genotoxicity testing is an important component of toxicity assessment. As illustrated by the European registration, evaluation, authorization, and restriction of chemicals (REACH) directive, it concerns all the chemicals used in industry. The commonly used in vivo mammalian tests appear to be ill ad...

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Autores principales: Lombardot, Benoit, Oh, Chun-Taek, Kwak, Jihoon, Genovesio, Auguste, Kang, Myungjoo, Hansen, Michael Adsett Edberg, Han, Sung-Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4382174/
https://www.ncbi.nlm.nih.gov/pubmed/25830368
http://dx.doi.org/10.1371/journal.pone.0121287
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author Lombardot, Benoit
Oh, Chun-Taek
Kwak, Jihoon
Genovesio, Auguste
Kang, Myungjoo
Hansen, Michael Adsett Edberg
Han, Sung-Jun
author_facet Lombardot, Benoit
Oh, Chun-Taek
Kwak, Jihoon
Genovesio, Auguste
Kang, Myungjoo
Hansen, Michael Adsett Edberg
Han, Sung-Jun
author_sort Lombardot, Benoit
collection PubMed
description Genotoxicity testing is an important component of toxicity assessment. As illustrated by the European registration, evaluation, authorization, and restriction of chemicals (REACH) directive, it concerns all the chemicals used in industry. The commonly used in vivo mammalian tests appear to be ill adapted to tackle the large compound sets involved, due to throughput, cost, and ethical issues. The somatic mutation and recombination test (SMART) represents a more scalable alternative, since it uses Drosophila, which develops faster and requires less infrastructure. Despite these advantages, the manual scoring of the hairs on Drosophila wings required for the SMART limits its usage. To overcome this limitation, we have developed an automated SMART readout. It consists of automated imaging, followed by an image analysis pipeline that measures individual wing genotoxicity scores. Finally, we have developed a wing score-based dose-dependency approach that can provide genotoxicity profiles. We have validated our method using 6 compounds, obtaining profiles almost identical to those obtained from manual measures, even for low-genotoxicity compounds such as urethane. The automated SMART, with its faster and more reliable readout, fulfills the need for a high-throughput in vivo test. The flexible imaging strategy we describe and the analysis tools we provide should facilitate the optimization and dissemination of our methods.
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spelling pubmed-43821742015-04-09 High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART) Lombardot, Benoit Oh, Chun-Taek Kwak, Jihoon Genovesio, Auguste Kang, Myungjoo Hansen, Michael Adsett Edberg Han, Sung-Jun PLoS One Research Article Genotoxicity testing is an important component of toxicity assessment. As illustrated by the European registration, evaluation, authorization, and restriction of chemicals (REACH) directive, it concerns all the chemicals used in industry. The commonly used in vivo mammalian tests appear to be ill adapted to tackle the large compound sets involved, due to throughput, cost, and ethical issues. The somatic mutation and recombination test (SMART) represents a more scalable alternative, since it uses Drosophila, which develops faster and requires less infrastructure. Despite these advantages, the manual scoring of the hairs on Drosophila wings required for the SMART limits its usage. To overcome this limitation, we have developed an automated SMART readout. It consists of automated imaging, followed by an image analysis pipeline that measures individual wing genotoxicity scores. Finally, we have developed a wing score-based dose-dependency approach that can provide genotoxicity profiles. We have validated our method using 6 compounds, obtaining profiles almost identical to those obtained from manual measures, even for low-genotoxicity compounds such as urethane. The automated SMART, with its faster and more reliable readout, fulfills the need for a high-throughput in vivo test. The flexible imaging strategy we describe and the analysis tools we provide should facilitate the optimization and dissemination of our methods. Public Library of Science 2015-04-01 /pmc/articles/PMC4382174/ /pubmed/25830368 http://dx.doi.org/10.1371/journal.pone.0121287 Text en © 2015 Lombardot et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Lombardot, Benoit
Oh, Chun-Taek
Kwak, Jihoon
Genovesio, Auguste
Kang, Myungjoo
Hansen, Michael Adsett Edberg
Han, Sung-Jun
High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART)
title High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART)
title_full High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART)
title_fullStr High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART)
title_full_unstemmed High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART)
title_short High-Throughput In Vivo Genotoxicity Testing: An Automated Readout System for the Somatic Mutation and Recombination Test (SMART)
title_sort high-throughput in vivo genotoxicity testing: an automated readout system for the somatic mutation and recombination test (smart)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4382174/
https://www.ncbi.nlm.nih.gov/pubmed/25830368
http://dx.doi.org/10.1371/journal.pone.0121287
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