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AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides
AHTPDB (http://crdd.osdd.net/raghava/ahtpdb/) is a manually curated database of experimentally validated antihypertensive peptides. Information pertaining to peptides with antihypertensive activity was collected from research articles and from various peptide repositories. These peptides were derive...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383949/ https://www.ncbi.nlm.nih.gov/pubmed/25392419 http://dx.doi.org/10.1093/nar/gku1141 |
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author | Kumar, Ravi Chaudhary, Kumardeep Sharma, Minakshi Nagpal, Gandharva Chauhan, Jagat Singh Singh, Sandeep Gautam, Ankur Raghava, Gajendra P.S. |
author_facet | Kumar, Ravi Chaudhary, Kumardeep Sharma, Minakshi Nagpal, Gandharva Chauhan, Jagat Singh Singh, Sandeep Gautam, Ankur Raghava, Gajendra P.S. |
author_sort | Kumar, Ravi |
collection | PubMed |
description | AHTPDB (http://crdd.osdd.net/raghava/ahtpdb/) is a manually curated database of experimentally validated antihypertensive peptides. Information pertaining to peptides with antihypertensive activity was collected from research articles and from various peptide repositories. These peptides were derived from 35 major sources that include milk, egg, fish, pork, chicken, soybean, etc. In AHTPDB, most of the peptides belong to a family of angiotensin-I converting enzyme inhibiting peptides. The current release of AHTPDB contains 5978 peptide entries among which 1694 are unique peptides. Each entry provides detailed information about a peptide like sequence, inhibitory concentration (IC(50)), toxicity/bitterness value, source, length, molecular mass and information related to purification of peptides. In addition, the database provides structural information of these peptides that includes predicted tertiary and secondary structures. A user-friendly web interface with various tools has been developed to retrieve and analyse the data. It is anticipated that AHTPDB will be a useful and unique resource for the researchers working in the field of antihypertensive peptides. |
format | Online Article Text |
id | pubmed-4383949 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-43839492015-04-08 AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides Kumar, Ravi Chaudhary, Kumardeep Sharma, Minakshi Nagpal, Gandharva Chauhan, Jagat Singh Singh, Sandeep Gautam, Ankur Raghava, Gajendra P.S. Nucleic Acids Res Database Issue AHTPDB (http://crdd.osdd.net/raghava/ahtpdb/) is a manually curated database of experimentally validated antihypertensive peptides. Information pertaining to peptides with antihypertensive activity was collected from research articles and from various peptide repositories. These peptides were derived from 35 major sources that include milk, egg, fish, pork, chicken, soybean, etc. In AHTPDB, most of the peptides belong to a family of angiotensin-I converting enzyme inhibiting peptides. The current release of AHTPDB contains 5978 peptide entries among which 1694 are unique peptides. Each entry provides detailed information about a peptide like sequence, inhibitory concentration (IC(50)), toxicity/bitterness value, source, length, molecular mass and information related to purification of peptides. In addition, the database provides structural information of these peptides that includes predicted tertiary and secondary structures. A user-friendly web interface with various tools has been developed to retrieve and analyse the data. It is anticipated that AHTPDB will be a useful and unique resource for the researchers working in the field of antihypertensive peptides. Oxford University Press 2014-11-11 2015-01-28 /pmc/articles/PMC4383949/ /pubmed/25392419 http://dx.doi.org/10.1093/nar/gku1141 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Database Issue Kumar, Ravi Chaudhary, Kumardeep Sharma, Minakshi Nagpal, Gandharva Chauhan, Jagat Singh Singh, Sandeep Gautam, Ankur Raghava, Gajendra P.S. AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides |
title | AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides |
title_full | AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides |
title_fullStr | AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides |
title_full_unstemmed | AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides |
title_short | AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides |
title_sort | ahtpdb: a comprehensive platform for analysis and presentation of antihypertensive peptides |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383949/ https://www.ncbi.nlm.nih.gov/pubmed/25392419 http://dx.doi.org/10.1093/nar/gku1141 |
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