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AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides

AHTPDB (http://crdd.osdd.net/raghava/ahtpdb/) is a manually curated database of experimentally validated antihypertensive peptides. Information pertaining to peptides with antihypertensive activity was collected from research articles and from various peptide repositories. These peptides were derive...

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Autores principales: Kumar, Ravi, Chaudhary, Kumardeep, Sharma, Minakshi, Nagpal, Gandharva, Chauhan, Jagat Singh, Singh, Sandeep, Gautam, Ankur, Raghava, Gajendra P.S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383949/
https://www.ncbi.nlm.nih.gov/pubmed/25392419
http://dx.doi.org/10.1093/nar/gku1141
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author Kumar, Ravi
Chaudhary, Kumardeep
Sharma, Minakshi
Nagpal, Gandharva
Chauhan, Jagat Singh
Singh, Sandeep
Gautam, Ankur
Raghava, Gajendra P.S.
author_facet Kumar, Ravi
Chaudhary, Kumardeep
Sharma, Minakshi
Nagpal, Gandharva
Chauhan, Jagat Singh
Singh, Sandeep
Gautam, Ankur
Raghava, Gajendra P.S.
author_sort Kumar, Ravi
collection PubMed
description AHTPDB (http://crdd.osdd.net/raghava/ahtpdb/) is a manually curated database of experimentally validated antihypertensive peptides. Information pertaining to peptides with antihypertensive activity was collected from research articles and from various peptide repositories. These peptides were derived from 35 major sources that include milk, egg, fish, pork, chicken, soybean, etc. In AHTPDB, most of the peptides belong to a family of angiotensin-I converting enzyme inhibiting peptides. The current release of AHTPDB contains 5978 peptide entries among which 1694 are unique peptides. Each entry provides detailed information about a peptide like sequence, inhibitory concentration (IC(50)), toxicity/bitterness value, source, length, molecular mass and information related to purification of peptides. In addition, the database provides structural information of these peptides that includes predicted tertiary and secondary structures. A user-friendly web interface with various tools has been developed to retrieve and analyse the data. It is anticipated that AHTPDB will be a useful and unique resource for the researchers working in the field of antihypertensive peptides.
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spelling pubmed-43839492015-04-08 AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides Kumar, Ravi Chaudhary, Kumardeep Sharma, Minakshi Nagpal, Gandharva Chauhan, Jagat Singh Singh, Sandeep Gautam, Ankur Raghava, Gajendra P.S. Nucleic Acids Res Database Issue AHTPDB (http://crdd.osdd.net/raghava/ahtpdb/) is a manually curated database of experimentally validated antihypertensive peptides. Information pertaining to peptides with antihypertensive activity was collected from research articles and from various peptide repositories. These peptides were derived from 35 major sources that include milk, egg, fish, pork, chicken, soybean, etc. In AHTPDB, most of the peptides belong to a family of angiotensin-I converting enzyme inhibiting peptides. The current release of AHTPDB contains 5978 peptide entries among which 1694 are unique peptides. Each entry provides detailed information about a peptide like sequence, inhibitory concentration (IC(50)), toxicity/bitterness value, source, length, molecular mass and information related to purification of peptides. In addition, the database provides structural information of these peptides that includes predicted tertiary and secondary structures. A user-friendly web interface with various tools has been developed to retrieve and analyse the data. It is anticipated that AHTPDB will be a useful and unique resource for the researchers working in the field of antihypertensive peptides. Oxford University Press 2014-11-11 2015-01-28 /pmc/articles/PMC4383949/ /pubmed/25392419 http://dx.doi.org/10.1093/nar/gku1141 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Kumar, Ravi
Chaudhary, Kumardeep
Sharma, Minakshi
Nagpal, Gandharva
Chauhan, Jagat Singh
Singh, Sandeep
Gautam, Ankur
Raghava, Gajendra P.S.
AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides
title AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides
title_full AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides
title_fullStr AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides
title_full_unstemmed AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides
title_short AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides
title_sort ahtpdb: a comprehensive platform for analysis and presentation of antihypertensive peptides
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383949/
https://www.ncbi.nlm.nih.gov/pubmed/25392419
http://dx.doi.org/10.1093/nar/gku1141
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