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The IPD and IMGT/HLA database: allele variant databases

The Immuno Polymorphism Database (IPD) was developed to provide a centralized system for the study of polymorphism in genes of the immune system. Through the IPD project we have established a central platform for the curation and publication of locus-specific databases involved either directly or re...

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Autores principales: Robinson, James, Halliwell, Jason A., Hayhurst, James D., Flicek, Paul, Parham, Peter, Marsh, Steven G. E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383959/
https://www.ncbi.nlm.nih.gov/pubmed/25414341
http://dx.doi.org/10.1093/nar/gku1161
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author Robinson, James
Halliwell, Jason A.
Hayhurst, James D.
Flicek, Paul
Parham, Peter
Marsh, Steven G. E.
author_facet Robinson, James
Halliwell, Jason A.
Hayhurst, James D.
Flicek, Paul
Parham, Peter
Marsh, Steven G. E.
author_sort Robinson, James
collection PubMed
description The Immuno Polymorphism Database (IPD) was developed to provide a centralized system for the study of polymorphism in genes of the immune system. Through the IPD project we have established a central platform for the curation and publication of locus-specific databases involved either directly or related to the function of the Major Histocompatibility Complex in a number of different species. We have collaborated with specialist groups or nomenclature committees that curate the individual sections before they are submitted to IPD for online publication. IPD consists of five core databases, with the IMGT/HLA Database as the primary database. Through the work of the various nomenclature committees, the HLA Informatics Group and in collaboration with the European Bioinformatics Institute we are able to provide public access to this data through the website http://www.ebi.ac.uk/ipd/. The IPD project continues to develop with new tools being added to address scientific developments, such as Next Generation Sequencing, and to address user feedback and requests. Regular updates to the website ensure that new and confirmatory sequences are dispersed to the immunogenetics community, and the wider research and clinical communities.
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spelling pubmed-43839592015-04-08 The IPD and IMGT/HLA database: allele variant databases Robinson, James Halliwell, Jason A. Hayhurst, James D. Flicek, Paul Parham, Peter Marsh, Steven G. E. Nucleic Acids Res Database Issue The Immuno Polymorphism Database (IPD) was developed to provide a centralized system for the study of polymorphism in genes of the immune system. Through the IPD project we have established a central platform for the curation and publication of locus-specific databases involved either directly or related to the function of the Major Histocompatibility Complex in a number of different species. We have collaborated with specialist groups or nomenclature committees that curate the individual sections before they are submitted to IPD for online publication. IPD consists of five core databases, with the IMGT/HLA Database as the primary database. Through the work of the various nomenclature committees, the HLA Informatics Group and in collaboration with the European Bioinformatics Institute we are able to provide public access to this data through the website http://www.ebi.ac.uk/ipd/. The IPD project continues to develop with new tools being added to address scientific developments, such as Next Generation Sequencing, and to address user feedback and requests. Regular updates to the website ensure that new and confirmatory sequences are dispersed to the immunogenetics community, and the wider research and clinical communities. Oxford University Press 2014-11-20 2015-01-28 /pmc/articles/PMC4383959/ /pubmed/25414341 http://dx.doi.org/10.1093/nar/gku1161 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Robinson, James
Halliwell, Jason A.
Hayhurst, James D.
Flicek, Paul
Parham, Peter
Marsh, Steven G. E.
The IPD and IMGT/HLA database: allele variant databases
title The IPD and IMGT/HLA database: allele variant databases
title_full The IPD and IMGT/HLA database: allele variant databases
title_fullStr The IPD and IMGT/HLA database: allele variant databases
title_full_unstemmed The IPD and IMGT/HLA database: allele variant databases
title_short The IPD and IMGT/HLA database: allele variant databases
title_sort ipd and imgt/hla database: allele variant databases
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383959/
https://www.ncbi.nlm.nih.gov/pubmed/25414341
http://dx.doi.org/10.1093/nar/gku1161
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