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LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs
Long non-coding RNAs (lncRNAs) perform a diversity of functions in numerous important biological processes and are implicated in many human diseases. In this report we present lncRNAWiki (http://lncrna.big.ac.cn), a wiki-based platform that is open-content and publicly editable and aimed at communit...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383965/ https://www.ncbi.nlm.nih.gov/pubmed/25399417 http://dx.doi.org/10.1093/nar/gku1167 |
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author | Ma, Lina Li, Ang Zou, Dong Xu, Xingjian Xia, Lin Yu, Jun Bajic, Vladimir B. Zhang, Zhang |
author_facet | Ma, Lina Li, Ang Zou, Dong Xu, Xingjian Xia, Lin Yu, Jun Bajic, Vladimir B. Zhang, Zhang |
author_sort | Ma, Lina |
collection | PubMed |
description | Long non-coding RNAs (lncRNAs) perform a diversity of functions in numerous important biological processes and are implicated in many human diseases. In this report we present lncRNAWiki (http://lncrna.big.ac.cn), a wiki-based platform that is open-content and publicly editable and aimed at community-based curation and collection of information on human lncRNAs. Current related databases are dependent primarily on curation by experts, making it laborious to annotate the exponentially accumulated information on lncRNAs, which inevitably requires collective efforts in community-based curation of lncRNAs. Unlike existing databases, lncRNAWiki features comprehensive integration of information on human lncRNAs obtained from multiple different resources and allows not only existing lncRNAs to be edited, updated and curated by different users but also the addition of newly identified lncRNAs by any user. It harnesses community collective knowledge in collecting, editing and annotating human lncRNAs and rewards community-curated efforts by providing explicit authorship based on quantified contributions. LncRNAWiki relies on the underling knowledge of scientific community for collective and collaborative curation of human lncRNAs and thus has the potential to serve as an up-to-date and comprehensive knowledgebase for human lncRNAs. |
format | Online Article Text |
id | pubmed-4383965 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-43839652015-04-08 LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs Ma, Lina Li, Ang Zou, Dong Xu, Xingjian Xia, Lin Yu, Jun Bajic, Vladimir B. Zhang, Zhang Nucleic Acids Res Database Issue Long non-coding RNAs (lncRNAs) perform a diversity of functions in numerous important biological processes and are implicated in many human diseases. In this report we present lncRNAWiki (http://lncrna.big.ac.cn), a wiki-based platform that is open-content and publicly editable and aimed at community-based curation and collection of information on human lncRNAs. Current related databases are dependent primarily on curation by experts, making it laborious to annotate the exponentially accumulated information on lncRNAs, which inevitably requires collective efforts in community-based curation of lncRNAs. Unlike existing databases, lncRNAWiki features comprehensive integration of information on human lncRNAs obtained from multiple different resources and allows not only existing lncRNAs to be edited, updated and curated by different users but also the addition of newly identified lncRNAs by any user. It harnesses community collective knowledge in collecting, editing and annotating human lncRNAs and rewards community-curated efforts by providing explicit authorship based on quantified contributions. LncRNAWiki relies on the underling knowledge of scientific community for collective and collaborative curation of human lncRNAs and thus has the potential to serve as an up-to-date and comprehensive knowledgebase for human lncRNAs. Oxford University Press 2014-11-15 2015-01-28 /pmc/articles/PMC4383965/ /pubmed/25399417 http://dx.doi.org/10.1093/nar/gku1167 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Database Issue Ma, Lina Li, Ang Zou, Dong Xu, Xingjian Xia, Lin Yu, Jun Bajic, Vladimir B. Zhang, Zhang LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs |
title | LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs |
title_full | LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs |
title_fullStr | LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs |
title_full_unstemmed | LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs |
title_short | LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs |
title_sort | lncrnawiki: harnessing community knowledge in collaborative curation of human long non-coding rnas |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383965/ https://www.ncbi.nlm.nih.gov/pubmed/25399417 http://dx.doi.org/10.1093/nar/gku1167 |
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