Cargando…

PLAZA 3.0: an access point for plant comparative genomics

Comparative sequence analysis has significantly altered our view on the complexity of genome organization and gene functions in different kingdoms. PLAZA 3.0 is designed to make comparative genomics data for plants available through a user-friendly web interface. Structural and functional annotation...

Descripción completa

Detalles Bibliográficos
Autores principales:	Proost, Sebastian, Van Bel, Michiel, Vaneechoutte, Dries, Van de Peer, Yves, Inzé, Dirk, Mueller-Roeber, Bernd, Vandepoele, Klaas
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Database Issue
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384038/ https://www.ncbi.nlm.nih.gov/pubmed/25324309 http://dx.doi.org/10.1093/nar/gku986

Ejemplares similares

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics
por: Van Bel, Michiel, et al.
Publicado: (2018)

PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants
por: Van Bel, Michiel, et al.
Publicado: (2021)

SIGNOR 3.0, the SIGnaling network open resource 3.0: 2022 update
por: Lo Surdo, Prisca, et al.
Publicado: (2022)

i-ADHoRe 3.0—fast and sensitive detection of genomic homology in extremely large data sets
por: Proost, Sebastian, et al.
Publicado: (2012)

The immune epitope database (IEDB) 3.0
por: Vita, Randi, et al.
Publicado: (2014)

PINA 3.0: mining cancer interactome
por: Du, Yang, et al.
Publicado: (2020)

TRAPID: an efficient online tool for the functional and comparative analysis of de novo RNA-Seq transcriptomes
por: Van Bel, Michiel, et al.
Publicado: (2013)

BRAD V3.0: an upgraded Brassicaceae database
por: Chen, Haixu, et al.
Publicado: (2021)

OrthoInspector 3.0: open portal for comparative genomics
por: Nevers, Yannis, et al.
Publicado: (2019)

MoonProt 3.0: an update of the moonlighting proteins database
por: Chen, Chang, et al.
Publicado: (2020)

An update on LNCipedia: a database for annotated human lncRNA sequences
por: Volders, Pieter-Jan, et al.
Publicado: (2014)

StreptomeDB 3.0: an updated compendium of streptomycetes natural products
por: Moumbock, Aurélien F A, et al.
Publicado: (2020)

The international glycan repository GlyTouCan version 3.0
por: Fujita, Akihiro, et al.
Publicado: (2020)

DRAMP 3.0: an enhanced comprehensive data repository of antimicrobial peptides
por: Shi, Guobang, et al.
Publicado: (2021)

DGIdb 3.0: a redesign and expansion of the drug–gene interaction database
por: Cotto, Kelsy C, et al.
Publicado: (2018)

LSD 3.0: a comprehensive resource for the leaf senescence research community
por: Li, Zhonghai, et al.
Publicado: (2020)

SilkDB 3.0: visualizing and exploring multiple levels of data for silkworm
por: Lu, Fang, et al.
Publicado: (2020)

eQuilibrator 3.0: a database solution for thermodynamic constant estimation
por: Beber, Moritz E, et al.
Publicado: (2021)

Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes
por: Santos, Alberto, et al.
Publicado: (2014)

ORegAnno 3.0: a community-driven resource for curated regulatory annotation
por: Lesurf, Robert, et al.
Publicado: (2016)

COLOMBOS v3.0: leveraging gene expression compendia for cross-species analyses
por: Moretto, Marco, et al.
Publicado: (2016)

ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks
por: Shen, Qiancheng, et al.
Publicado: (2016)

PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity
por: Rozanski, Andrei, et al.
Publicado: (2019)

SEA version 3.0: a comprehensive extension and update of the Super-Enhancer archive
por: Chen, Chuangeng, et al.
Publicado: (2020)

DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators
por: Georgakilas, Georgios, et al.
Publicado: (2016)

sRNATarBase 3.0: an updated database for sRNA-target interactions in bacteria
por: Wang, Jiang, et al.
Publicado: (2016)

PRGdb 3.0: a comprehensive platform for prediction and analysis of plant disease resistance genes
por: Osuna-Cruz, Cristina M, et al.
Publicado: (2018)

MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins
por: Piovesan, Damiano, et al.
Publicado: (2018)

MethBank 3.0: a database of DNA methylomes across a variety of species
por: Li, Rujiao, et al.
Publicado: (2018)

AnimalTFDB 3.0: a comprehensive resource for annotation and prediction of animal transcription factors
por: Hu, Hui, et al.
Publicado: (2019)

MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems
por: Gumerov, Vadim M, et al.
Publicado: (2020)

MNDR v3.0: mammal ncRNA–disease repository with increased coverage and annotation
por: Ning, Lin, et al.
Publicado: (2020)

VIPERdb v3.0: a structure-based data analytics platform for viral capsids
por: Montiel-Garcia, Daniel, et al.
Publicado: (2020)

SuperNatural 3.0—a database of natural products and natural product-based derivatives
por: Gallo, Kathleen, et al.
Publicado: (2022)

MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters
por: Terlouw, Barbara R, et al.
Publicado: (2022)

Proteome-pI 2.0: proteome isoelectric point database update
por: Kozlowski, Lukasz Pawel
Publicado: (2021)

HMDD v3.0: a database for experimentally supported human microRNA–disease associations
por: Huang, Zhou, et al.
Publicado: (2019)

MitoCarta3.0: an updated mitochondrial proteome now with sub-organelle localization and pathway annotations
por: Rath, Sneha, et al.
Publicado: (2020)

DiseaseMeth version 3.0: a major expansion and update of the human disease methylation database
por: Xing, Jie, et al.
Publicado: (2021)

ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining
por: Lee, Myunggyo, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_6kfn3gh4nnq0tmqn977a9patbq