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Design and Implementation of a Biomolecular Concentration Tracker

[Image: see text] As a field, synthetic biology strives to engineer increasingly complex artificial systems in living cells. Active feedback in closed loop systems offers a dynamic and adaptive way to ensure constant relative activity independent of intrinsic and extrinsic noise. In this work, we us...

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Autores principales: Hsiao, Victoria, de los Santos, Emmanuel L. C., Whitaker, Weston R., Dueber, John E., Murray, Richard M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2014
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384833/
https://www.ncbi.nlm.nih.gov/pubmed/24847683
http://dx.doi.org/10.1021/sb500024b
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author Hsiao, Victoria
de los Santos, Emmanuel L. C.
Whitaker, Weston R.
Dueber, John E.
Murray, Richard M.
author_facet Hsiao, Victoria
de los Santos, Emmanuel L. C.
Whitaker, Weston R.
Dueber, John E.
Murray, Richard M.
author_sort Hsiao, Victoria
collection PubMed
description [Image: see text] As a field, synthetic biology strives to engineer increasingly complex artificial systems in living cells. Active feedback in closed loop systems offers a dynamic and adaptive way to ensure constant relative activity independent of intrinsic and extrinsic noise. In this work, we use synthetic protein scaffolds as a modular and tunable mechanism for concentration tracking through negative feedback. Input to the circuit initiates scaffold production, leading to colocalization of a two-component system and resulting in the production of an inhibitory antiscaffold protein. Using a combination of modeling and experimental work, we show that the biomolecular concentration tracker circuit achieves dynamic protein concentration tracking in Escherichia coli and that steady state outputs can be tuned.
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spelling pubmed-43848332015-05-06 Design and Implementation of a Biomolecular Concentration Tracker Hsiao, Victoria de los Santos, Emmanuel L. C. Whitaker, Weston R. Dueber, John E. Murray, Richard M. ACS Synth Biol [Image: see text] As a field, synthetic biology strives to engineer increasingly complex artificial systems in living cells. Active feedback in closed loop systems offers a dynamic and adaptive way to ensure constant relative activity independent of intrinsic and extrinsic noise. In this work, we use synthetic protein scaffolds as a modular and tunable mechanism for concentration tracking through negative feedback. Input to the circuit initiates scaffold production, leading to colocalization of a two-component system and resulting in the production of an inhibitory antiscaffold protein. Using a combination of modeling and experimental work, we show that the biomolecular concentration tracker circuit achieves dynamic protein concentration tracking in Escherichia coli and that steady state outputs can be tuned. American Chemical Society 2014-05-06 2015-02-20 /pmc/articles/PMC4384833/ /pubmed/24847683 http://dx.doi.org/10.1021/sb500024b Text en Copyright © 2014 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Hsiao, Victoria
de los Santos, Emmanuel L. C.
Whitaker, Weston R.
Dueber, John E.
Murray, Richard M.
Design and Implementation of a Biomolecular Concentration Tracker
title Design and Implementation of a Biomolecular Concentration Tracker
title_full Design and Implementation of a Biomolecular Concentration Tracker
title_fullStr Design and Implementation of a Biomolecular Concentration Tracker
title_full_unstemmed Design and Implementation of a Biomolecular Concentration Tracker
title_short Design and Implementation of a Biomolecular Concentration Tracker
title_sort design and implementation of a biomolecular concentration tracker
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384833/
https://www.ncbi.nlm.nih.gov/pubmed/24847683
http://dx.doi.org/10.1021/sb500024b
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