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Easy method for production of a home-made DNA ladder in every laboratory

BACKGROUND: Molecular DNA markers are one of the essential tools in molecular biology labs with varied applications. In the present study, we suggest an efficient and available strategy to produce molecular size marker in routine laboratories. MATERIALS AND METHODS: To achieve the desired sizes of D...

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Autores principales: Abbasian, Mahdi, Seyedi, Hadieh Alsadat Eslampanah, Boroujeni, Zahra Khalili, Mofid, Mohammad Reza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Medknow Publications & Media Pvt Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4386206/
https://www.ncbi.nlm.nih.gov/pubmed/25878995
http://dx.doi.org/10.4103/2277-9175.153894
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author Abbasian, Mahdi
Seyedi, Hadieh Alsadat Eslampanah
Boroujeni, Zahra Khalili
Mofid, Mohammad Reza
author_facet Abbasian, Mahdi
Seyedi, Hadieh Alsadat Eslampanah
Boroujeni, Zahra Khalili
Mofid, Mohammad Reza
author_sort Abbasian, Mahdi
collection PubMed
description BACKGROUND: Molecular DNA markers are one of the essential tools in molecular biology labs with varied applications. In the present study, we suggest an efficient and available strategy to produce molecular size marker in routine laboratories. MATERIALS AND METHODS: To achieve the desired sizes of DNA fragments, we recruited PCR and bioinformatics techniques to synthesize 14 DNA fragments ranging from 100 to 3000 bp. RESULTS: Holistic analysis of different parameters in primers design resulted in amplification of fragments in just one PCR program without any by-product and purification step. Our applied method enables researchers to modify amplified DNA fragments by wide range of chemical modifications toward varied applications. CONCLUSION: Method of home-made DNA ladder production by available ingredients and routine techniques reported in this study can be used in common laboratories for different applications.
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spelling pubmed-43862062015-04-15 Easy method for production of a home-made DNA ladder in every laboratory Abbasian, Mahdi Seyedi, Hadieh Alsadat Eslampanah Boroujeni, Zahra Khalili Mofid, Mohammad Reza Adv Biomed Res Original Article BACKGROUND: Molecular DNA markers are one of the essential tools in molecular biology labs with varied applications. In the present study, we suggest an efficient and available strategy to produce molecular size marker in routine laboratories. MATERIALS AND METHODS: To achieve the desired sizes of DNA fragments, we recruited PCR and bioinformatics techniques to synthesize 14 DNA fragments ranging from 100 to 3000 bp. RESULTS: Holistic analysis of different parameters in primers design resulted in amplification of fragments in just one PCR program without any by-product and purification step. Our applied method enables researchers to modify amplified DNA fragments by wide range of chemical modifications toward varied applications. CONCLUSION: Method of home-made DNA ladder production by available ingredients and routine techniques reported in this study can be used in common laboratories for different applications. Medknow Publications & Media Pvt Ltd 2015-03-25 /pmc/articles/PMC4386206/ /pubmed/25878995 http://dx.doi.org/10.4103/2277-9175.153894 Text en Copyright: © 2015 Abbasian. http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Original Article
Abbasian, Mahdi
Seyedi, Hadieh Alsadat Eslampanah
Boroujeni, Zahra Khalili
Mofid, Mohammad Reza
Easy method for production of a home-made DNA ladder in every laboratory
title Easy method for production of a home-made DNA ladder in every laboratory
title_full Easy method for production of a home-made DNA ladder in every laboratory
title_fullStr Easy method for production of a home-made DNA ladder in every laboratory
title_full_unstemmed Easy method for production of a home-made DNA ladder in every laboratory
title_short Easy method for production of a home-made DNA ladder in every laboratory
title_sort easy method for production of a home-made dna ladder in every laboratory
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4386206/
https://www.ncbi.nlm.nih.gov/pubmed/25878995
http://dx.doi.org/10.4103/2277-9175.153894
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