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Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data
Random forests (RFs) have been widely used as a powerful classification method. However, with the randomization in both bagging samples and feature selection, the trees in the forest tend to select uninformative features for node splitting. This makes RFs have poor accuracy when working with high-di...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4387916/ https://www.ncbi.nlm.nih.gov/pubmed/25879059 http://dx.doi.org/10.1155/2015/471371 |
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author | Nguyen, Thanh-Tung Huang, Joshua Zhexue Nguyen, Thuy Thi |
author_facet | Nguyen, Thanh-Tung Huang, Joshua Zhexue Nguyen, Thuy Thi |
author_sort | Nguyen, Thanh-Tung |
collection | PubMed |
description | Random forests (RFs) have been widely used as a powerful classification method. However, with the randomization in both bagging samples and feature selection, the trees in the forest tend to select uninformative features for node splitting. This makes RFs have poor accuracy when working with high-dimensional data. Besides that, RFs have bias in the feature selection process where multivalued features are favored. Aiming at debiasing feature selection in RFs, we propose a new RF algorithm, called xRF, to select good features in learning RFs for high-dimensional data. We first remove the uninformative features using p-value assessment, and the subset of unbiased features is then selected based on some statistical measures. This feature subset is then partitioned into two subsets. A feature weighting sampling technique is used to sample features from these two subsets for building trees. This approach enables one to generate more accurate trees, while allowing one to reduce dimensionality and the amount of data needed for learning RFs. An extensive set of experiments has been conducted on 47 high-dimensional real-world datasets including image datasets. The experimental results have shown that RFs with the proposed approach outperformed the existing random forests in increasing the accuracy and the AUC measures. |
format | Online Article Text |
id | pubmed-4387916 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-43879162015-04-15 Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data Nguyen, Thanh-Tung Huang, Joshua Zhexue Nguyen, Thuy Thi ScientificWorldJournal Research Article Random forests (RFs) have been widely used as a powerful classification method. However, with the randomization in both bagging samples and feature selection, the trees in the forest tend to select uninformative features for node splitting. This makes RFs have poor accuracy when working with high-dimensional data. Besides that, RFs have bias in the feature selection process where multivalued features are favored. Aiming at debiasing feature selection in RFs, we propose a new RF algorithm, called xRF, to select good features in learning RFs for high-dimensional data. We first remove the uninformative features using p-value assessment, and the subset of unbiased features is then selected based on some statistical measures. This feature subset is then partitioned into two subsets. A feature weighting sampling technique is used to sample features from these two subsets for building trees. This approach enables one to generate more accurate trees, while allowing one to reduce dimensionality and the amount of data needed for learning RFs. An extensive set of experiments has been conducted on 47 high-dimensional real-world datasets including image datasets. The experimental results have shown that RFs with the proposed approach outperformed the existing random forests in increasing the accuracy and the AUC measures. Hindawi Publishing Corporation 2015 2015-03-24 /pmc/articles/PMC4387916/ /pubmed/25879059 http://dx.doi.org/10.1155/2015/471371 Text en Copyright © 2015 Thanh-Tung Nguyen et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Nguyen, Thanh-Tung Huang, Joshua Zhexue Nguyen, Thuy Thi Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data |
title | Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data |
title_full | Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data |
title_fullStr | Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data |
title_full_unstemmed | Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data |
title_short | Unbiased Feature Selection in Learning Random Forests for High-Dimensional Data |
title_sort | unbiased feature selection in learning random forests for high-dimensional data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4387916/ https://www.ncbi.nlm.nih.gov/pubmed/25879059 http://dx.doi.org/10.1155/2015/471371 |
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