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UDP-sulfoquinovose formation by Sulfolobus acidocaldarius
The UDP-sulfoquinovose synthase Agl3 from Sulfolobus acidocaldarius converts UDP-d-glucose and sulfite to UDP-sulfoquinovose, the activated form of sulfoquinovose required for its incorporation into glycoconjugates. Based on the amino acid sequence, Agl3 belongs to the short-chain dehydrogenase/redu...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Japan
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4388408/ https://www.ncbi.nlm.nih.gov/pubmed/25605538 http://dx.doi.org/10.1007/s00792-015-0730-9 |
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author | Zolghadr, Behnam Gasselhuber, Bernhard Windwarder, Markus Pabst, Martin Kracher, Daniel Kerndl, Martina Zayni, Sonja Hofinger-Horvath, Andreas Ludwig, Roland Haltrich, Dietmar Oostenbrink, Chris Obinger, Christian Kosma, Paul Messner, Paul Schäffer, Christina |
author_facet | Zolghadr, Behnam Gasselhuber, Bernhard Windwarder, Markus Pabst, Martin Kracher, Daniel Kerndl, Martina Zayni, Sonja Hofinger-Horvath, Andreas Ludwig, Roland Haltrich, Dietmar Oostenbrink, Chris Obinger, Christian Kosma, Paul Messner, Paul Schäffer, Christina |
author_sort | Zolghadr, Behnam |
collection | PubMed |
description | The UDP-sulfoquinovose synthase Agl3 from Sulfolobus acidocaldarius converts UDP-d-glucose and sulfite to UDP-sulfoquinovose, the activated form of sulfoquinovose required for its incorporation into glycoconjugates. Based on the amino acid sequence, Agl3 belongs to the short-chain dehydrogenase/reductase enzyme superfamily, together with SQD1 from Arabidopsis thaliana, the only UDP-sulfoquinovose synthase with known crystal structure. By comparison of sequence and structure of Agl3 and SQD1, putative catalytic amino acids of Agl3 were selected for mutational analysis. The obtained data suggest for Agl3 a modified dehydratase reaction mechanism. We propose that in vitro biosynthesis of UDP-sulfoquinovose occurs through an NAD(+)-dependent oxidation/dehydration/enolization/sulfite addition process. In the absence of a sulfur donor, UDP-d-glucose is converted via UDP-4-keto-d-glucose to UDP-d-glucose-5,6-ene, the structure of which was determined by (1)H and (13)C-NMR spectroscopy. During the redox reaction the cofactor remains tightly bound to Agl3 and participates in the reaction in a concentration-dependent manner. For the first time, the rapid initial electron transfer between UDP-d-glucose and NAD(+) could be monitored in a UDP-sulfoquinovose synthase. Deuterium labeling confirmed that dehydration of UDP-d-glucose occurs only from the enol form of UDP-4-keto-glucose. The obtained functional data are compared with those from other UDP-sulfoquinovose synthases. A divergent evolution of Agl3 from S. acidocaldarius is suggested. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s00792-015-0730-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4388408 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer Japan |
record_format | MEDLINE/PubMed |
spelling | pubmed-43884082015-04-07 UDP-sulfoquinovose formation by Sulfolobus acidocaldarius Zolghadr, Behnam Gasselhuber, Bernhard Windwarder, Markus Pabst, Martin Kracher, Daniel Kerndl, Martina Zayni, Sonja Hofinger-Horvath, Andreas Ludwig, Roland Haltrich, Dietmar Oostenbrink, Chris Obinger, Christian Kosma, Paul Messner, Paul Schäffer, Christina Extremophiles Original Paper The UDP-sulfoquinovose synthase Agl3 from Sulfolobus acidocaldarius converts UDP-d-glucose and sulfite to UDP-sulfoquinovose, the activated form of sulfoquinovose required for its incorporation into glycoconjugates. Based on the amino acid sequence, Agl3 belongs to the short-chain dehydrogenase/reductase enzyme superfamily, together with SQD1 from Arabidopsis thaliana, the only UDP-sulfoquinovose synthase with known crystal structure. By comparison of sequence and structure of Agl3 and SQD1, putative catalytic amino acids of Agl3 were selected for mutational analysis. The obtained data suggest for Agl3 a modified dehydratase reaction mechanism. We propose that in vitro biosynthesis of UDP-sulfoquinovose occurs through an NAD(+)-dependent oxidation/dehydration/enolization/sulfite addition process. In the absence of a sulfur donor, UDP-d-glucose is converted via UDP-4-keto-d-glucose to UDP-d-glucose-5,6-ene, the structure of which was determined by (1)H and (13)C-NMR spectroscopy. During the redox reaction the cofactor remains tightly bound to Agl3 and participates in the reaction in a concentration-dependent manner. For the first time, the rapid initial electron transfer between UDP-d-glucose and NAD(+) could be monitored in a UDP-sulfoquinovose synthase. Deuterium labeling confirmed that dehydration of UDP-d-glucose occurs only from the enol form of UDP-4-keto-glucose. The obtained functional data are compared with those from other UDP-sulfoquinovose synthases. A divergent evolution of Agl3 from S. acidocaldarius is suggested. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s00792-015-0730-9) contains supplementary material, which is available to authorized users. Springer Japan 2015-01-21 2015 /pmc/articles/PMC4388408/ /pubmed/25605538 http://dx.doi.org/10.1007/s00792-015-0730-9 Text en © The Author(s) 2015 https://creativecommons.org/licenses/by/4.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Original Paper Zolghadr, Behnam Gasselhuber, Bernhard Windwarder, Markus Pabst, Martin Kracher, Daniel Kerndl, Martina Zayni, Sonja Hofinger-Horvath, Andreas Ludwig, Roland Haltrich, Dietmar Oostenbrink, Chris Obinger, Christian Kosma, Paul Messner, Paul Schäffer, Christina UDP-sulfoquinovose formation by Sulfolobus acidocaldarius |
title | UDP-sulfoquinovose formation by Sulfolobus acidocaldarius |
title_full | UDP-sulfoquinovose formation by Sulfolobus acidocaldarius |
title_fullStr | UDP-sulfoquinovose formation by Sulfolobus acidocaldarius |
title_full_unstemmed | UDP-sulfoquinovose formation by Sulfolobus acidocaldarius |
title_short | UDP-sulfoquinovose formation by Sulfolobus acidocaldarius |
title_sort | udp-sulfoquinovose formation by sulfolobus acidocaldarius |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4388408/ https://www.ncbi.nlm.nih.gov/pubmed/25605538 http://dx.doi.org/10.1007/s00792-015-0730-9 |
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