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A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH
PURPOSE: Genetic basis of Developmental dysplasia of the hip (DDH) remains largely unknown. To find new susceptibility genes for DDH, we carried out a genome-wide association study (GWAS) for DDH. METHODS: We enrolled 386 radiology confirmed DDH patients and 558 healthy controls (Set A) to conduct a...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4388640/ https://www.ncbi.nlm.nih.gov/pubmed/25848760 http://dx.doi.org/10.1371/journal.pone.0120212 |
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author | Sun, Ye Wang, Cheng Hao, Zheng Dai, Jin Chen, Dongyang Xu, Zhihong Shi, Dongquan Mao, Ping Teng, Huajian Gao, Xiang Hu, Zhibin Shen, Hongbing Jiang, Qing |
author_facet | Sun, Ye Wang, Cheng Hao, Zheng Dai, Jin Chen, Dongyang Xu, Zhihong Shi, Dongquan Mao, Ping Teng, Huajian Gao, Xiang Hu, Zhibin Shen, Hongbing Jiang, Qing |
author_sort | Sun, Ye |
collection | PubMed |
description | PURPOSE: Genetic basis of Developmental dysplasia of the hip (DDH) remains largely unknown. To find new susceptibility genes for DDH, we carried out a genome-wide association study (GWAS) for DDH. METHODS: We enrolled 386 radiology confirmed DDH patients and 558 healthy controls (Set A) to conduct a genome-wide association study (GWAS). Quality-control was conducted at both the sample and single nucleotide polymorphism (SNP) levels. We then conducted a subsequent case-control study to replicate the association between a promising loci, rs6060373 in UQCC gene and DDH in an independent set of 755 cases and 944 controls (set B). RESULTS: In the DDH GWAS discovering stage, 51 SNPs showed significance of less than 10(-4), and another 577 SNPs showed significance of less than 10-3. In UQCC, all the 12 genotyped SNPs showed as promising risk loci. Genotyping of rs6060373 in set A showed the minor allele A as a promising risk allele (p = 4.82*10(-7)). In set A, the odds ratio of allele A was 1.77. Genotyping of rs6060373 in Set B produced another significant result (p = 0.0338) with an odds ratio of 1.18 for risk allele A. Combining set A and set B, we identified a total p value of 3.63*10(-6) with the odds ratio of 1.35 (1.19–1.53) for allele A. CONCLUSION: Our study demonstrates common variants of UQCC, specifically rs6060373, are associated with DDH in Han Chinese population. |
format | Online Article Text |
id | pubmed-4388640 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43886402015-04-21 A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH Sun, Ye Wang, Cheng Hao, Zheng Dai, Jin Chen, Dongyang Xu, Zhihong Shi, Dongquan Mao, Ping Teng, Huajian Gao, Xiang Hu, Zhibin Shen, Hongbing Jiang, Qing PLoS One Research Article PURPOSE: Genetic basis of Developmental dysplasia of the hip (DDH) remains largely unknown. To find new susceptibility genes for DDH, we carried out a genome-wide association study (GWAS) for DDH. METHODS: We enrolled 386 radiology confirmed DDH patients and 558 healthy controls (Set A) to conduct a genome-wide association study (GWAS). Quality-control was conducted at both the sample and single nucleotide polymorphism (SNP) levels. We then conducted a subsequent case-control study to replicate the association between a promising loci, rs6060373 in UQCC gene and DDH in an independent set of 755 cases and 944 controls (set B). RESULTS: In the DDH GWAS discovering stage, 51 SNPs showed significance of less than 10(-4), and another 577 SNPs showed significance of less than 10-3. In UQCC, all the 12 genotyped SNPs showed as promising risk loci. Genotyping of rs6060373 in set A showed the minor allele A as a promising risk allele (p = 4.82*10(-7)). In set A, the odds ratio of allele A was 1.77. Genotyping of rs6060373 in Set B produced another significant result (p = 0.0338) with an odds ratio of 1.18 for risk allele A. Combining set A and set B, we identified a total p value of 3.63*10(-6) with the odds ratio of 1.35 (1.19–1.53) for allele A. CONCLUSION: Our study demonstrates common variants of UQCC, specifically rs6060373, are associated with DDH in Han Chinese population. Public Library of Science 2015-04-07 /pmc/articles/PMC4388640/ /pubmed/25848760 http://dx.doi.org/10.1371/journal.pone.0120212 Text en © 2015 Sun et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Sun, Ye Wang, Cheng Hao, Zheng Dai, Jin Chen, Dongyang Xu, Zhihong Shi, Dongquan Mao, Ping Teng, Huajian Gao, Xiang Hu, Zhibin Shen, Hongbing Jiang, Qing A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH |
title | A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH |
title_full | A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH |
title_fullStr | A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH |
title_full_unstemmed | A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH |
title_short | A Common Variant Of Ubiquinol-Cytochrome c Reductase Complex Is Associated with DDH |
title_sort | common variant of ubiquinol-cytochrome c reductase complex is associated with ddh |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4388640/ https://www.ncbi.nlm.nih.gov/pubmed/25848760 http://dx.doi.org/10.1371/journal.pone.0120212 |
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