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Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population
BACKGROUND: Previous studies proved that interferon gamma (IFN-γ) gene polymorphisms were associated with the risk of hepatitis B virus (HBV) infection. However, the association between IFN-γ polymorphisms and HBV-related liver cirrhosis (HBV-LC) risk is still unclear. METHODS: IFN-γ +874 T/A and +2...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4389711/ https://www.ncbi.nlm.nih.gov/pubmed/25861244 http://dx.doi.org/10.1186/s12935-015-0184-2 |
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author | Sun, Yifan Lu, Yu Xie, Li Deng, Yan Li, Shan Qin, Xue |
author_facet | Sun, Yifan Lu, Yu Xie, Li Deng, Yan Li, Shan Qin, Xue |
author_sort | Sun, Yifan |
collection | PubMed |
description | BACKGROUND: Previous studies proved that interferon gamma (IFN-γ) gene polymorphisms were associated with the risk of hepatitis B virus (HBV) infection. However, the association between IFN-γ polymorphisms and HBV-related liver cirrhosis (HBV-LC) risk is still unclear. METHODS: IFN-γ +874 T/A and +2109G/A genotypes were determined in 126 HBV-LC patients, 129 chronic hepatitis B(CHB) patients, and 173 early HBV infection controls using a sequence-specific primer-polymerase chain reaction and a polymerase chain reaction-restriction fragment length polymorphism, respectively. RESULTS: Significant associations were observed between +2109A/G polymorphisms and HBV-LC risk in the co-dominant model (GG vs. AA: OR = 0.321, 95% CI = 0.130-0.793, P = 0.014), the allelic model (OR = 0.565, 95% CI = 0.388-0.825, P = 0.003), the dominant model (OR = 0.551, 95% CI = 0.344-0.883, P = 0.013), and the recessive model (OR = 0.385, 95% CI = 0.159-0.930, P = 0.034). In addition, haplotype analysis indicated that the T(+874)G(+2109) haplotype significantly decreased the HBV-LC risk (OR = 0.106, 95% CI = 0.022-0.502, P = 0.000), and A(+874)A(+2109) haplotype significantly increased the LC risk (OR = 1.485, 95% CI = 1.065-2.070, P = 0.019). No significant associations were observed between IFN-γ +874 T/A polymorphisms and HBV-LC risk, as well as the two single-nucleotide polymorphisms (SNPs) and CHB risk (P > 0.05). CONCLUSIONS: Our observations suggested a significant association of IFN-γ polymorphisms with HBV-LC risk in the Chinese population. |
format | Online Article Text |
id | pubmed-4389711 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-43897112015-04-09 Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population Sun, Yifan Lu, Yu Xie, Li Deng, Yan Li, Shan Qin, Xue Cancer Cell Int Primary Research BACKGROUND: Previous studies proved that interferon gamma (IFN-γ) gene polymorphisms were associated with the risk of hepatitis B virus (HBV) infection. However, the association between IFN-γ polymorphisms and HBV-related liver cirrhosis (HBV-LC) risk is still unclear. METHODS: IFN-γ +874 T/A and +2109G/A genotypes were determined in 126 HBV-LC patients, 129 chronic hepatitis B(CHB) patients, and 173 early HBV infection controls using a sequence-specific primer-polymerase chain reaction and a polymerase chain reaction-restriction fragment length polymorphism, respectively. RESULTS: Significant associations were observed between +2109A/G polymorphisms and HBV-LC risk in the co-dominant model (GG vs. AA: OR = 0.321, 95% CI = 0.130-0.793, P = 0.014), the allelic model (OR = 0.565, 95% CI = 0.388-0.825, P = 0.003), the dominant model (OR = 0.551, 95% CI = 0.344-0.883, P = 0.013), and the recessive model (OR = 0.385, 95% CI = 0.159-0.930, P = 0.034). In addition, haplotype analysis indicated that the T(+874)G(+2109) haplotype significantly decreased the HBV-LC risk (OR = 0.106, 95% CI = 0.022-0.502, P = 0.000), and A(+874)A(+2109) haplotype significantly increased the LC risk (OR = 1.485, 95% CI = 1.065-2.070, P = 0.019). No significant associations were observed between IFN-γ +874 T/A polymorphisms and HBV-LC risk, as well as the two single-nucleotide polymorphisms (SNPs) and CHB risk (P > 0.05). CONCLUSIONS: Our observations suggested a significant association of IFN-γ polymorphisms with HBV-LC risk in the Chinese population. BioMed Central 2015-03-31 /pmc/articles/PMC4389711/ /pubmed/25861244 http://dx.doi.org/10.1186/s12935-015-0184-2 Text en © Sun et al.; licensee BioMed Central. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Primary Research Sun, Yifan Lu, Yu Xie, Li Deng, Yan Li, Shan Qin, Xue Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population |
title | Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population |
title_full | Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population |
title_fullStr | Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population |
title_full_unstemmed | Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population |
title_short | Interferon gamma polymorphisms and hepatitis B virus-related liver cirrhosis risk in a Chinese population |
title_sort | interferon gamma polymorphisms and hepatitis b virus-related liver cirrhosis risk in a chinese population |
topic | Primary Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4389711/ https://www.ncbi.nlm.nih.gov/pubmed/25861244 http://dx.doi.org/10.1186/s12935-015-0184-2 |
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