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Emergent Chemical Behavior in Variable-Volume Protocells

Artificial protocellular compartments and lipid vesicles have been used as model systems to understand the origins and requirements for early cells, as well as to design encapsulated reactors for biotechnology. One prominent feature of vesicles is the semi-permeable nature of their membranes, able t...

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Detalles Bibliográficos
Autores principales: Shirt-Ediss, Ben, Solé, Ricard V., Ruiz-Mirazo, Kepa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4390847/
https://www.ncbi.nlm.nih.gov/pubmed/25590570
http://dx.doi.org/10.3390/life5010181
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author Shirt-Ediss, Ben
Solé, Ricard V.
Ruiz-Mirazo, Kepa
author_facet Shirt-Ediss, Ben
Solé, Ricard V.
Ruiz-Mirazo, Kepa
author_sort Shirt-Ediss, Ben
collection PubMed
description Artificial protocellular compartments and lipid vesicles have been used as model systems to understand the origins and requirements for early cells, as well as to design encapsulated reactors for biotechnology. One prominent feature of vesicles is the semi-permeable nature of their membranes, able to support passive diffusion of individual solute species into/out of the compartment, in addition to an osmotic water flow in the opposite direction to the net solute concentration gradient. Crucially, this water flow affects the internal aqueous volume of the vesicle in response to osmotic imbalances, in particular those created by ongoing reactions within the system. In this theoretical study, we pay attention to this often overlooked aspect and show, via the use of a simple semi-spatial vesicle reactor model, that a changing solvent volume introduces interesting non-linearities into an encapsulated chemistry. Focusing on bistability, we demonstrate how a changing volume compartment can degenerate existing bistable reactions, but also promote emergent bistability from very simple reactions, which are not bistable in bulk conditions. One particularly remarkable effect is that two or more chemically-independent reactions, with mutually exclusive reaction kinetics, are able to couple their dynamics through the variation of solvent volume inside the vesicle. Our results suggest that other chemical innovations should be expected when more realistic and active properties of protocellular compartments are taken into account.
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spelling pubmed-43908472015-05-21 Emergent Chemical Behavior in Variable-Volume Protocells Shirt-Ediss, Ben Solé, Ricard V. Ruiz-Mirazo, Kepa Life (Basel) Article Artificial protocellular compartments and lipid vesicles have been used as model systems to understand the origins and requirements for early cells, as well as to design encapsulated reactors for biotechnology. One prominent feature of vesicles is the semi-permeable nature of their membranes, able to support passive diffusion of individual solute species into/out of the compartment, in addition to an osmotic water flow in the opposite direction to the net solute concentration gradient. Crucially, this water flow affects the internal aqueous volume of the vesicle in response to osmotic imbalances, in particular those created by ongoing reactions within the system. In this theoretical study, we pay attention to this often overlooked aspect and show, via the use of a simple semi-spatial vesicle reactor model, that a changing solvent volume introduces interesting non-linearities into an encapsulated chemistry. Focusing on bistability, we demonstrate how a changing volume compartment can degenerate existing bistable reactions, but also promote emergent bistability from very simple reactions, which are not bistable in bulk conditions. One particularly remarkable effect is that two or more chemically-independent reactions, with mutually exclusive reaction kinetics, are able to couple their dynamics through the variation of solvent volume inside the vesicle. Our results suggest that other chemical innovations should be expected when more realistic and active properties of protocellular compartments are taken into account. MDPI 2015-01-13 /pmc/articles/PMC4390847/ /pubmed/25590570 http://dx.doi.org/10.3390/life5010181 Text en © 2015 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shirt-Ediss, Ben
Solé, Ricard V.
Ruiz-Mirazo, Kepa
Emergent Chemical Behavior in Variable-Volume Protocells
title Emergent Chemical Behavior in Variable-Volume Protocells
title_full Emergent Chemical Behavior in Variable-Volume Protocells
title_fullStr Emergent Chemical Behavior in Variable-Volume Protocells
title_full_unstemmed Emergent Chemical Behavior in Variable-Volume Protocells
title_short Emergent Chemical Behavior in Variable-Volume Protocells
title_sort emergent chemical behavior in variable-volume protocells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4390847/
https://www.ncbi.nlm.nih.gov/pubmed/25590570
http://dx.doi.org/10.3390/life5010181
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