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What Is the Most Realistic Single-Compartment Model of Spike Initiation?

A large variety of neuron models are used in theoretical and computational neuroscience, and among these, single-compartment models are a popular kind. These models do not explicitly include the dendrites or the axon, and range from the Hodgkin-Huxley (HH) model to various flavors of integrate-and-f...

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Detalles Bibliográficos
Autor principal: Brette, Romain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4391789/
https://www.ncbi.nlm.nih.gov/pubmed/25856629
http://dx.doi.org/10.1371/journal.pcbi.1004114
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author Brette, Romain
author_facet Brette, Romain
author_sort Brette, Romain
collection PubMed
description A large variety of neuron models are used in theoretical and computational neuroscience, and among these, single-compartment models are a popular kind. These models do not explicitly include the dendrites or the axon, and range from the Hodgkin-Huxley (HH) model to various flavors of integrate-and-fire (IF) models. The main classes of models differ in the way spikes are initiated. Which one is the most realistic? Starting with some general epistemological considerations, I show that the notion of realism comes in two dimensions: empirical content (the sort of predictions that a model can produce) and empirical accuracy (whether these predictions are correct). I then examine the realism of the main classes of single-compartment models along these two dimensions, in light of recent experimental evidence.
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spelling pubmed-43917892015-04-21 What Is the Most Realistic Single-Compartment Model of Spike Initiation? Brette, Romain PLoS Comput Biol Review A large variety of neuron models are used in theoretical and computational neuroscience, and among these, single-compartment models are a popular kind. These models do not explicitly include the dendrites or the axon, and range from the Hodgkin-Huxley (HH) model to various flavors of integrate-and-fire (IF) models. The main classes of models differ in the way spikes are initiated. Which one is the most realistic? Starting with some general epistemological considerations, I show that the notion of realism comes in two dimensions: empirical content (the sort of predictions that a model can produce) and empirical accuracy (whether these predictions are correct). I then examine the realism of the main classes of single-compartment models along these two dimensions, in light of recent experimental evidence. Public Library of Science 2015-04-09 /pmc/articles/PMC4391789/ /pubmed/25856629 http://dx.doi.org/10.1371/journal.pcbi.1004114 Text en © 2015 Romain Brette http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Review
Brette, Romain
What Is the Most Realistic Single-Compartment Model of Spike Initiation?
title What Is the Most Realistic Single-Compartment Model of Spike Initiation?
title_full What Is the Most Realistic Single-Compartment Model of Spike Initiation?
title_fullStr What Is the Most Realistic Single-Compartment Model of Spike Initiation?
title_full_unstemmed What Is the Most Realistic Single-Compartment Model of Spike Initiation?
title_short What Is the Most Realistic Single-Compartment Model of Spike Initiation?
title_sort what is the most realistic single-compartment model of spike initiation?
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4391789/
https://www.ncbi.nlm.nih.gov/pubmed/25856629
http://dx.doi.org/10.1371/journal.pcbi.1004114
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