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What Is the Most Realistic Single-Compartment Model of Spike Initiation?
A large variety of neuron models are used in theoretical and computational neuroscience, and among these, single-compartment models are a popular kind. These models do not explicitly include the dendrites or the axon, and range from the Hodgkin-Huxley (HH) model to various flavors of integrate-and-f...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4391789/ https://www.ncbi.nlm.nih.gov/pubmed/25856629 http://dx.doi.org/10.1371/journal.pcbi.1004114 |
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author | Brette, Romain |
author_facet | Brette, Romain |
author_sort | Brette, Romain |
collection | PubMed |
description | A large variety of neuron models are used in theoretical and computational neuroscience, and among these, single-compartment models are a popular kind. These models do not explicitly include the dendrites or the axon, and range from the Hodgkin-Huxley (HH) model to various flavors of integrate-and-fire (IF) models. The main classes of models differ in the way spikes are initiated. Which one is the most realistic? Starting with some general epistemological considerations, I show that the notion of realism comes in two dimensions: empirical content (the sort of predictions that a model can produce) and empirical accuracy (whether these predictions are correct). I then examine the realism of the main classes of single-compartment models along these two dimensions, in light of recent experimental evidence. |
format | Online Article Text |
id | pubmed-4391789 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43917892015-04-21 What Is the Most Realistic Single-Compartment Model of Spike Initiation? Brette, Romain PLoS Comput Biol Review A large variety of neuron models are used in theoretical and computational neuroscience, and among these, single-compartment models are a popular kind. These models do not explicitly include the dendrites or the axon, and range from the Hodgkin-Huxley (HH) model to various flavors of integrate-and-fire (IF) models. The main classes of models differ in the way spikes are initiated. Which one is the most realistic? Starting with some general epistemological considerations, I show that the notion of realism comes in two dimensions: empirical content (the sort of predictions that a model can produce) and empirical accuracy (whether these predictions are correct). I then examine the realism of the main classes of single-compartment models along these two dimensions, in light of recent experimental evidence. Public Library of Science 2015-04-09 /pmc/articles/PMC4391789/ /pubmed/25856629 http://dx.doi.org/10.1371/journal.pcbi.1004114 Text en © 2015 Romain Brette http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Review Brette, Romain What Is the Most Realistic Single-Compartment Model of Spike Initiation? |
title | What Is the Most Realistic Single-Compartment Model of Spike Initiation? |
title_full | What Is the Most Realistic Single-Compartment Model of Spike Initiation? |
title_fullStr | What Is the Most Realistic Single-Compartment Model of Spike Initiation? |
title_full_unstemmed | What Is the Most Realistic Single-Compartment Model of Spike Initiation? |
title_short | What Is the Most Realistic Single-Compartment Model of Spike Initiation? |
title_sort | what is the most realistic single-compartment model of spike initiation? |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4391789/ https://www.ncbi.nlm.nih.gov/pubmed/25856629 http://dx.doi.org/10.1371/journal.pcbi.1004114 |
work_keys_str_mv | AT bretteromain whatisthemostrealisticsinglecompartmentmodelofspikeinitiation |