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Anatomical curve identification

Methods for capturing images in three dimensions are now widely available, with stereo-photogrammetry and laser scanning being two common approaches. In anatomical studies, a number of landmarks are usually identified manually from each of these images and these form the basis of subsequent statisti...

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Autores principales: Bowman, Adrian W., Katina, Stanislav, Smith, Joanna, Brown, Denise
Formato: Online Artículo Texto
Lenguaje:English
Publicado: North-Holland Pub. Co 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4394146/
https://www.ncbi.nlm.nih.gov/pubmed/26041943
http://dx.doi.org/10.1016/j.csda.2014.12.007
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author Bowman, Adrian W.
Katina, Stanislav
Smith, Joanna
Brown, Denise
author_facet Bowman, Adrian W.
Katina, Stanislav
Smith, Joanna
Brown, Denise
author_sort Bowman, Adrian W.
collection PubMed
description Methods for capturing images in three dimensions are now widely available, with stereo-photogrammetry and laser scanning being two common approaches. In anatomical studies, a number of landmarks are usually identified manually from each of these images and these form the basis of subsequent statistical analysis. However, landmarks express only a very small proportion of the information available from the images. Anatomically defined curves have the advantage of providing a much richer expression of shape. This is explored in the context of identifying the boundary of breasts from an image of the female torso and the boundary of the lips from a facial image. The curves of interest are characterised by ridges or valleys. Key issues in estimation are the ability to navigate across the anatomical surface in three-dimensions, the ability to recognise the relevant boundary and the need to assess the evidence for the presence of the surface feature of interest. The first issue is addressed by the use of principal curves, as an extension of principal components, the second by suitable assessment of curvature and the third by change-point detection. P-spline smoothing is used as an integral part of the methods but adaptations are made to the specific anatomical features of interest. After estimation of the boundary curves, the intermediate surfaces of the anatomical feature of interest can be characterised by surface interpolation. This allows shape variation to be explored using standard methods such as principal components. These tools are applied to a collection of images of women where one breast has been reconstructed after mastectomy and where interest lies in shape differences between the reconstructed and unreconstructed breasts. They are also applied to a collection of lip images where possible differences in shape between males and females are of interest.
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spelling pubmed-43941462015-06-01 Anatomical curve identification Bowman, Adrian W. Katina, Stanislav Smith, Joanna Brown, Denise Comput Stat Data Anal Article Methods for capturing images in three dimensions are now widely available, with stereo-photogrammetry and laser scanning being two common approaches. In anatomical studies, a number of landmarks are usually identified manually from each of these images and these form the basis of subsequent statistical analysis. However, landmarks express only a very small proportion of the information available from the images. Anatomically defined curves have the advantage of providing a much richer expression of shape. This is explored in the context of identifying the boundary of breasts from an image of the female torso and the boundary of the lips from a facial image. The curves of interest are characterised by ridges or valleys. Key issues in estimation are the ability to navigate across the anatomical surface in three-dimensions, the ability to recognise the relevant boundary and the need to assess the evidence for the presence of the surface feature of interest. The first issue is addressed by the use of principal curves, as an extension of principal components, the second by suitable assessment of curvature and the third by change-point detection. P-spline smoothing is used as an integral part of the methods but adaptations are made to the specific anatomical features of interest. After estimation of the boundary curves, the intermediate surfaces of the anatomical feature of interest can be characterised by surface interpolation. This allows shape variation to be explored using standard methods such as principal components. These tools are applied to a collection of images of women where one breast has been reconstructed after mastectomy and where interest lies in shape differences between the reconstructed and unreconstructed breasts. They are also applied to a collection of lip images where possible differences in shape between males and females are of interest. North-Holland Pub. Co 2015-06 /pmc/articles/PMC4394146/ /pubmed/26041943 http://dx.doi.org/10.1016/j.csda.2014.12.007 Text en © 2014 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Bowman, Adrian W.
Katina, Stanislav
Smith, Joanna
Brown, Denise
Anatomical curve identification
title Anatomical curve identification
title_full Anatomical curve identification
title_fullStr Anatomical curve identification
title_full_unstemmed Anatomical curve identification
title_short Anatomical curve identification
title_sort anatomical curve identification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4394146/
https://www.ncbi.nlm.nih.gov/pubmed/26041943
http://dx.doi.org/10.1016/j.csda.2014.12.007
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