De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data

The genus Endornavirus is a double-stranded RNA virus that infects a wide range of hosts. In this study, we report on the de novo assembly of a bell pepper endornavirus genome sequence by RNA sequencing (RNA-Seq). Our result demonstrates the successful application of RNA-Seq to obtain a complete vir...

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Detalles Bibliográficos
Autores principales: Jo, Yeonhwa, Choi, Hoseng, Cho, Won Kyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2015
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4395069/
https://www.ncbi.nlm.nih.gov/pubmed/25792042
http://dx.doi.org/10.1128/genomeA.00061-15
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author Jo, Yeonhwa
Choi, Hoseng
Cho, Won Kyong
author_facet Jo, Yeonhwa
Choi, Hoseng
Cho, Won Kyong
author_sort Jo, Yeonhwa
collection PubMed
description The genus Endornavirus is a double-stranded RNA virus that infects a wide range of hosts. In this study, we report on the de novo assembly of a bell pepper endornavirus genome sequence by RNA sequencing (RNA-Seq). Our result demonstrates the successful application of RNA-Seq to obtain a complete viral genome sequence from the transcriptome data.
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spelling pubmed-43950692015-04-15 De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data Jo, Yeonhwa Choi, Hoseng Cho, Won Kyong Genome Announc Viruses The genus Endornavirus is a double-stranded RNA virus that infects a wide range of hosts. In this study, we report on the de novo assembly of a bell pepper endornavirus genome sequence by RNA sequencing (RNA-Seq). Our result demonstrates the successful application of RNA-Seq to obtain a complete viral genome sequence from the transcriptome data. American Society for Microbiology 2015-03-19 /pmc/articles/PMC4395069/ /pubmed/25792042 http://dx.doi.org/10.1128/genomeA.00061-15 Text en Copyright © 2015 Jo et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Viruses
Jo, Yeonhwa
Choi, Hoseng
Cho, Won Kyong
De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data
title De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data
title_full De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data
title_fullStr De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data
title_full_unstemmed De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data
title_short De Novo Assembly of a Bell Pepper Endornavirus Genome Sequence Using RNA Sequencing Data
title_sort de novo assembly of a bell pepper endornavirus genome sequence using rna sequencing data
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4395069/
https://www.ncbi.nlm.nih.gov/pubmed/25792042
http://dx.doi.org/10.1128/genomeA.00061-15
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AT choihoseng denovoassemblyofabellpepperendornavirusgenomesequenceusingrnasequencingdata
AT chowonkyong denovoassemblyofabellpepperendornavirusgenomesequenceusingrnasequencingdata

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