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Construction of Multi-Scale Consistent Brain Networks: Methods and Applications
Mapping human brain networks provides a basis for studying brain function and dysfunction, and thus has gained significant interest in recent years. However, modeling human brain networks still faces several challenges including constructing networks at multiple spatial scales and finding common cor...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4395249/ https://www.ncbi.nlm.nih.gov/pubmed/25876038 http://dx.doi.org/10.1371/journal.pone.0118175 |
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author | Ge, Bao Tian, Yin Hu, Xintao Chen, Hanbo Zhu, Dajiang Zhang, Tuo Han, Junwei Guo, Lei Liu, Tianming |
author_facet | Ge, Bao Tian, Yin Hu, Xintao Chen, Hanbo Zhu, Dajiang Zhang, Tuo Han, Junwei Guo, Lei Liu, Tianming |
author_sort | Ge, Bao |
collection | PubMed |
description | Mapping human brain networks provides a basis for studying brain function and dysfunction, and thus has gained significant interest in recent years. However, modeling human brain networks still faces several challenges including constructing networks at multiple spatial scales and finding common corresponding networks across individuals. As a consequence, many previous methods were designed for a single resolution or scale of brain network, though the brain networks are multi-scale in nature. To address this problem, this paper presents a novel approach to constructing multi-scale common structural brain networks from DTI data via an improved multi-scale spectral clustering applied on our recently developed and validated DICCCOLs (Dense Individualized and Common Connectivity-based Cortical Landmarks). Since the DICCCOL landmarks possess intrinsic structural correspondences across individuals and populations, we employed the multi-scale spectral clustering algorithm to group the DICCCOL landmarks and their connections into sub-networks, meanwhile preserving the intrinsically-established correspondences across multiple scales. Experimental results demonstrated that the proposed method can generate multi-scale consistent and common structural brain networks across subjects, and its reproducibility has been verified by multiple independent datasets. As an application, these multi-scale networks were used to guide the clustering of multi-scale fiber bundles and to compare the fiber integrity in schizophrenia and healthy controls. In general, our methods offer a novel and effective framework for brain network modeling and tract-based analysis of DTI data. |
format | Online Article Text |
id | pubmed-4395249 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-43952492015-04-21 Construction of Multi-Scale Consistent Brain Networks: Methods and Applications Ge, Bao Tian, Yin Hu, Xintao Chen, Hanbo Zhu, Dajiang Zhang, Tuo Han, Junwei Guo, Lei Liu, Tianming PLoS One Research Article Mapping human brain networks provides a basis for studying brain function and dysfunction, and thus has gained significant interest in recent years. However, modeling human brain networks still faces several challenges including constructing networks at multiple spatial scales and finding common corresponding networks across individuals. As a consequence, many previous methods were designed for a single resolution or scale of brain network, though the brain networks are multi-scale in nature. To address this problem, this paper presents a novel approach to constructing multi-scale common structural brain networks from DTI data via an improved multi-scale spectral clustering applied on our recently developed and validated DICCCOLs (Dense Individualized and Common Connectivity-based Cortical Landmarks). Since the DICCCOL landmarks possess intrinsic structural correspondences across individuals and populations, we employed the multi-scale spectral clustering algorithm to group the DICCCOL landmarks and their connections into sub-networks, meanwhile preserving the intrinsically-established correspondences across multiple scales. Experimental results demonstrated that the proposed method can generate multi-scale consistent and common structural brain networks across subjects, and its reproducibility has been verified by multiple independent datasets. As an application, these multi-scale networks were used to guide the clustering of multi-scale fiber bundles and to compare the fiber integrity in schizophrenia and healthy controls. In general, our methods offer a novel and effective framework for brain network modeling and tract-based analysis of DTI data. Public Library of Science 2015-04-13 /pmc/articles/PMC4395249/ /pubmed/25876038 http://dx.doi.org/10.1371/journal.pone.0118175 Text en © 2015 Ge et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Ge, Bao Tian, Yin Hu, Xintao Chen, Hanbo Zhu, Dajiang Zhang, Tuo Han, Junwei Guo, Lei Liu, Tianming Construction of Multi-Scale Consistent Brain Networks: Methods and Applications |
title | Construction of Multi-Scale Consistent Brain Networks: Methods and Applications |
title_full | Construction of Multi-Scale Consistent Brain Networks: Methods and Applications |
title_fullStr | Construction of Multi-Scale Consistent Brain Networks: Methods and Applications |
title_full_unstemmed | Construction of Multi-Scale Consistent Brain Networks: Methods and Applications |
title_short | Construction of Multi-Scale Consistent Brain Networks: Methods and Applications |
title_sort | construction of multi-scale consistent brain networks: methods and applications |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4395249/ https://www.ncbi.nlm.nih.gov/pubmed/25876038 http://dx.doi.org/10.1371/journal.pone.0118175 |
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