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Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing

Sleep spindles are critical in characterizing sleep and have been associated with cognitive function and pathophysiological assessment. Typically, their detection relies on the subjective and time-consuming visual examination of electroencephalogram (EEG) signal(s) by experts, and has led to large i...

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Autores principales: Tsanas, Athanasios, Clifford, Gari D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4396195/
https://www.ncbi.nlm.nih.gov/pubmed/25926784
http://dx.doi.org/10.3389/fnhum.2015.00181
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author Tsanas, Athanasios
Clifford, Gari D.
author_facet Tsanas, Athanasios
Clifford, Gari D.
author_sort Tsanas, Athanasios
collection PubMed
description Sleep spindles are critical in characterizing sleep and have been associated with cognitive function and pathophysiological assessment. Typically, their detection relies on the subjective and time-consuming visual examination of electroencephalogram (EEG) signal(s) by experts, and has led to large inter-rater variability as a result of poor definition of sleep spindle characteristics. Hitherto, many algorithmic spindle detectors inherently make signal stationarity assumptions (e.g., Fourier transform-based approaches) which are inappropriate for EEG signals, and frequently rely on additional information which may not be readily available in many practical settings (e.g., more than one EEG channels, or prior hypnogram assessment). This study proposes a novel signal processing methodology relying solely on a single EEG channel, and provides objective, accurate means toward probabilistically assessing the presence of sleep spindles in EEG signals. We use the intuitively appealing continuous wavelet transform (CWT) with a Morlet basis function, identifying regions of interest where the power of the CWT coefficients corresponding to the frequencies of spindles (11–16 Hz) is large. The potential for assessing the signal segment as a spindle is refined using local weighted smoothing techniques. We evaluate our findings on two databases: the MASS database comprising 19 healthy controls and the DREAMS sleep spindle database comprising eight participants diagnosed with various sleep pathologies. We demonstrate that we can replicate the experts' sleep spindles assessment accurately in both databases (MASS database: sensitivity: 84%, specificity: 90%, false discovery rate 83%, DREAMS database: sensitivity: 76%, specificity: 92%, false discovery rate: 67%), outperforming six competing automatic sleep spindle detection algorithms in terms of correctly replicating the experts' assessment of detected spindles.
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spelling pubmed-43961952015-04-29 Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing Tsanas, Athanasios Clifford, Gari D. Front Hum Neurosci Neuroscience Sleep spindles are critical in characterizing sleep and have been associated with cognitive function and pathophysiological assessment. Typically, their detection relies on the subjective and time-consuming visual examination of electroencephalogram (EEG) signal(s) by experts, and has led to large inter-rater variability as a result of poor definition of sleep spindle characteristics. Hitherto, many algorithmic spindle detectors inherently make signal stationarity assumptions (e.g., Fourier transform-based approaches) which are inappropriate for EEG signals, and frequently rely on additional information which may not be readily available in many practical settings (e.g., more than one EEG channels, or prior hypnogram assessment). This study proposes a novel signal processing methodology relying solely on a single EEG channel, and provides objective, accurate means toward probabilistically assessing the presence of sleep spindles in EEG signals. We use the intuitively appealing continuous wavelet transform (CWT) with a Morlet basis function, identifying regions of interest where the power of the CWT coefficients corresponding to the frequencies of spindles (11–16 Hz) is large. The potential for assessing the signal segment as a spindle is refined using local weighted smoothing techniques. We evaluate our findings on two databases: the MASS database comprising 19 healthy controls and the DREAMS sleep spindle database comprising eight participants diagnosed with various sleep pathologies. We demonstrate that we can replicate the experts' sleep spindles assessment accurately in both databases (MASS database: sensitivity: 84%, specificity: 90%, false discovery rate 83%, DREAMS database: sensitivity: 76%, specificity: 92%, false discovery rate: 67%), outperforming six competing automatic sleep spindle detection algorithms in terms of correctly replicating the experts' assessment of detected spindles. Frontiers Media S.A. 2015-04-08 /pmc/articles/PMC4396195/ /pubmed/25926784 http://dx.doi.org/10.3389/fnhum.2015.00181 Text en Copyright © 2015 Tsanas and Clifford. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Tsanas, Athanasios
Clifford, Gari D.
Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing
title Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing
title_full Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing
title_fullStr Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing
title_full_unstemmed Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing
title_short Stage-independent, single lead EEG sleep spindle detection using the continuous wavelet transform and local weighted smoothing
title_sort stage-independent, single lead eeg sleep spindle detection using the continuous wavelet transform and local weighted smoothing
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4396195/
https://www.ncbi.nlm.nih.gov/pubmed/25926784
http://dx.doi.org/10.3389/fnhum.2015.00181
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