Cargando…

Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China

A multiple linear model was developed for individual tree crown width of Cunninghamia lanceolata (Lamb.) Hook in Fujian province, southeast China. Data were obtained from 55 sample plots of pure China-fir plantation stands. An Ordinary Linear Least Squares (OLS) regression was used to establish the...

Descripción completa

Detalles Bibliográficos
Autores principales: Hao, Xu, Yujun, Sun, Xinjie, Wang, Jin, Wang, Yao, Fu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4398382/
https://www.ncbi.nlm.nih.gov/pubmed/25876178
http://dx.doi.org/10.1371/journal.pone.0122257
_version_ 1782366811348533248
author Hao, Xu
Yujun, Sun
Xinjie, Wang
Jin, Wang
Yao, Fu
author_facet Hao, Xu
Yujun, Sun
Xinjie, Wang
Jin, Wang
Yao, Fu
author_sort Hao, Xu
collection PubMed
description A multiple linear model was developed for individual tree crown width of Cunninghamia lanceolata (Lamb.) Hook in Fujian province, southeast China. Data were obtained from 55 sample plots of pure China-fir plantation stands. An Ordinary Linear Least Squares (OLS) regression was used to establish the crown width model. To adjust for correlations between observations from the same sample plots, we developed one level linear mixed-effects (LME) models based on the multiple linear model, which take into account the random effects of plots. The best random effects combinations for the LME models were determined by the Akaike’s information criterion, the Bayesian information criterion and the -2logarithm likelihood. Heteroscedasticity was reduced by three residual variance functions: the power function, the exponential function and the constant plus power function. The spatial correlation was modeled by three correlation structures: the first-order autoregressive structure [AR(1)], a combination of first-order autoregressive and moving average structures [ARMA(1,1)], and the compound symmetry structure (CS). Then, the LME model was compared to the multiple linear model using the absolute mean residual (AMR), the root mean square error (RMSE), and the adjusted coefficient of determination (adj-R (2)). For individual tree crown width models, the one level LME model showed the best performance. An independent dataset was used to test the performance of the models and to demonstrate the advantage of calibrating LME models.
format Online
Article
Text
id pubmed-4398382
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-43983822015-04-21 Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China Hao, Xu Yujun, Sun Xinjie, Wang Jin, Wang Yao, Fu PLoS One Research Article A multiple linear model was developed for individual tree crown width of Cunninghamia lanceolata (Lamb.) Hook in Fujian province, southeast China. Data were obtained from 55 sample plots of pure China-fir plantation stands. An Ordinary Linear Least Squares (OLS) regression was used to establish the crown width model. To adjust for correlations between observations from the same sample plots, we developed one level linear mixed-effects (LME) models based on the multiple linear model, which take into account the random effects of plots. The best random effects combinations for the LME models were determined by the Akaike’s information criterion, the Bayesian information criterion and the -2logarithm likelihood. Heteroscedasticity was reduced by three residual variance functions: the power function, the exponential function and the constant plus power function. The spatial correlation was modeled by three correlation structures: the first-order autoregressive structure [AR(1)], a combination of first-order autoregressive and moving average structures [ARMA(1,1)], and the compound symmetry structure (CS). Then, the LME model was compared to the multiple linear model using the absolute mean residual (AMR), the root mean square error (RMSE), and the adjusted coefficient of determination (adj-R (2)). For individual tree crown width models, the one level LME model showed the best performance. An independent dataset was used to test the performance of the models and to demonstrate the advantage of calibrating LME models. Public Library of Science 2015-04-15 /pmc/articles/PMC4398382/ /pubmed/25876178 http://dx.doi.org/10.1371/journal.pone.0122257 Text en © 2015 Hao et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Hao, Xu
Yujun, Sun
Xinjie, Wang
Jin, Wang
Yao, Fu
Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China
title Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China
title_full Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China
title_fullStr Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China
title_full_unstemmed Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China
title_short Linear Mixed-Effects Models to Describe Individual Tree Crown Width for China-Fir in Fujian Province, Southeast China
title_sort linear mixed-effects models to describe individual tree crown width for china-fir in fujian province, southeast china
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4398382/
https://www.ncbi.nlm.nih.gov/pubmed/25876178
http://dx.doi.org/10.1371/journal.pone.0122257
work_keys_str_mv AT haoxu linearmixedeffectsmodelstodescribeindividualtreecrownwidthforchinafirinfujianprovincesoutheastchina
AT yujunsun linearmixedeffectsmodelstodescribeindividualtreecrownwidthforchinafirinfujianprovincesoutheastchina
AT xinjiewang linearmixedeffectsmodelstodescribeindividualtreecrownwidthforchinafirinfujianprovincesoutheastchina
AT jinwang linearmixedeffectsmodelstodescribeindividualtreecrownwidthforchinafirinfujianprovincesoutheastchina
AT yaofu linearmixedeffectsmodelstodescribeindividualtreecrownwidthforchinafirinfujianprovincesoutheastchina