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Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease
Stargardt disease (STGD) is the leading cause of juvenile macular degeneration associated with progressive central vision loss, photophobia, and colour vision abnormalities. In this study, we have described the clinical and genetic features of Stargardt patients from an Indian cohort. The next gener...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4398921/ https://www.ncbi.nlm.nih.gov/pubmed/25922843 http://dx.doi.org/10.1155/2015/940864 |
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author | Battu, Rajani Verma, Anshuman Hariharan, Ramesh Krishna, Shuba Kiran, Ravi Jacob, Jemima Ganapathy, Aparna Ramprasad, Vedam L. Kumaramanickavel, Govindasamy Jeyabalan, Nallathambi Ghosh, Arkasubhra |
author_facet | Battu, Rajani Verma, Anshuman Hariharan, Ramesh Krishna, Shuba Kiran, Ravi Jacob, Jemima Ganapathy, Aparna Ramprasad, Vedam L. Kumaramanickavel, Govindasamy Jeyabalan, Nallathambi Ghosh, Arkasubhra |
author_sort | Battu, Rajani |
collection | PubMed |
description | Stargardt disease (STGD) is the leading cause of juvenile macular degeneration associated with progressive central vision loss, photophobia, and colour vision abnormalities. In this study, we have described the clinical and genetic features of Stargardt patients from an Indian cohort. The next generation sequencing was carried out in five clinically confirmed unrelated patients and their family members using a gene panel comprising 184 retinal specific genes. Sequencing results were analyzed by read mapping and variant calling in genes of interest, followed by their verification and interpretation. Genetic analysis revealed ABCA4 mutations in all of the five unrelated patients. Among these, four patients were found with compound heterozygous mutations and another one had homozygous mutation. All the affected individuals showed signs and symptoms consistent with the disease phenotype. We report two novel ABCA4 mutations in Indian patients with STGD disease, which expands the existing spectrum of disease-causing variants and the understanding of phenotypic and genotypic correlations. Screening for causative mutations in patients with STGD using panel of targeted gene sequencing by NGS would be a cost effective tool, might be helpful in confirming the precise diagnosis, and contributes towards the genetic counselling of asymptomatic carriers and isolated patients. |
format | Online Article Text |
id | pubmed-4398921 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-43989212015-04-28 Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease Battu, Rajani Verma, Anshuman Hariharan, Ramesh Krishna, Shuba Kiran, Ravi Jacob, Jemima Ganapathy, Aparna Ramprasad, Vedam L. Kumaramanickavel, Govindasamy Jeyabalan, Nallathambi Ghosh, Arkasubhra Biomed Res Int Research Article Stargardt disease (STGD) is the leading cause of juvenile macular degeneration associated with progressive central vision loss, photophobia, and colour vision abnormalities. In this study, we have described the clinical and genetic features of Stargardt patients from an Indian cohort. The next generation sequencing was carried out in five clinically confirmed unrelated patients and their family members using a gene panel comprising 184 retinal specific genes. Sequencing results were analyzed by read mapping and variant calling in genes of interest, followed by their verification and interpretation. Genetic analysis revealed ABCA4 mutations in all of the five unrelated patients. Among these, four patients were found with compound heterozygous mutations and another one had homozygous mutation. All the affected individuals showed signs and symptoms consistent with the disease phenotype. We report two novel ABCA4 mutations in Indian patients with STGD disease, which expands the existing spectrum of disease-causing variants and the understanding of phenotypic and genotypic correlations. Screening for causative mutations in patients with STGD using panel of targeted gene sequencing by NGS would be a cost effective tool, might be helpful in confirming the precise diagnosis, and contributes towards the genetic counselling of asymptomatic carriers and isolated patients. Hindawi Publishing Corporation 2015 2015-04-02 /pmc/articles/PMC4398921/ /pubmed/25922843 http://dx.doi.org/10.1155/2015/940864 Text en Copyright © 2015 Rajani Battu et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Battu, Rajani Verma, Anshuman Hariharan, Ramesh Krishna, Shuba Kiran, Ravi Jacob, Jemima Ganapathy, Aparna Ramprasad, Vedam L. Kumaramanickavel, Govindasamy Jeyabalan, Nallathambi Ghosh, Arkasubhra Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease |
title | Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease |
title_full | Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease |
title_fullStr | Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease |
title_full_unstemmed | Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease |
title_short | Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease |
title_sort | identification of novel mutations in abca4 gene: clinical and genetic analysis of indian patients with stargardt disease |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4398921/ https://www.ncbi.nlm.nih.gov/pubmed/25922843 http://dx.doi.org/10.1155/2015/940864 |
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