Cargando…

Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease

Stargardt disease (STGD) is the leading cause of juvenile macular degeneration associated with progressive central vision loss, photophobia, and colour vision abnormalities. In this study, we have described the clinical and genetic features of Stargardt patients from an Indian cohort. The next gener...

Descripción completa

Detalles Bibliográficos
Autores principales: Battu, Rajani, Verma, Anshuman, Hariharan, Ramesh, Krishna, Shuba, Kiran, Ravi, Jacob, Jemima, Ganapathy, Aparna, Ramprasad, Vedam L., Kumaramanickavel, Govindasamy, Jeyabalan, Nallathambi, Ghosh, Arkasubhra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4398921/
https://www.ncbi.nlm.nih.gov/pubmed/25922843
http://dx.doi.org/10.1155/2015/940864
_version_ 1782366866432327680
author Battu, Rajani
Verma, Anshuman
Hariharan, Ramesh
Krishna, Shuba
Kiran, Ravi
Jacob, Jemima
Ganapathy, Aparna
Ramprasad, Vedam L.
Kumaramanickavel, Govindasamy
Jeyabalan, Nallathambi
Ghosh, Arkasubhra
author_facet Battu, Rajani
Verma, Anshuman
Hariharan, Ramesh
Krishna, Shuba
Kiran, Ravi
Jacob, Jemima
Ganapathy, Aparna
Ramprasad, Vedam L.
Kumaramanickavel, Govindasamy
Jeyabalan, Nallathambi
Ghosh, Arkasubhra
author_sort Battu, Rajani
collection PubMed
description Stargardt disease (STGD) is the leading cause of juvenile macular degeneration associated with progressive central vision loss, photophobia, and colour vision abnormalities. In this study, we have described the clinical and genetic features of Stargardt patients from an Indian cohort. The next generation sequencing was carried out in five clinically confirmed unrelated patients and their family members using a gene panel comprising 184 retinal specific genes. Sequencing results were analyzed by read mapping and variant calling in genes of interest, followed by their verification and interpretation. Genetic analysis revealed ABCA4 mutations in all of the five unrelated patients. Among these, four patients were found with compound heterozygous mutations and another one had homozygous mutation. All the affected individuals showed signs and symptoms consistent with the disease phenotype. We report two novel ABCA4 mutations in Indian patients with STGD disease, which expands the existing spectrum of disease-causing variants and the understanding of phenotypic and genotypic correlations. Screening for causative mutations in patients with STGD using panel of targeted gene sequencing by NGS would be a cost effective tool, might be helpful in confirming the precise diagnosis, and contributes towards the genetic counselling of asymptomatic carriers and isolated patients.
format Online
Article
Text
id pubmed-4398921
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Hindawi Publishing Corporation
record_format MEDLINE/PubMed
spelling pubmed-43989212015-04-28 Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease Battu, Rajani Verma, Anshuman Hariharan, Ramesh Krishna, Shuba Kiran, Ravi Jacob, Jemima Ganapathy, Aparna Ramprasad, Vedam L. Kumaramanickavel, Govindasamy Jeyabalan, Nallathambi Ghosh, Arkasubhra Biomed Res Int Research Article Stargardt disease (STGD) is the leading cause of juvenile macular degeneration associated with progressive central vision loss, photophobia, and colour vision abnormalities. In this study, we have described the clinical and genetic features of Stargardt patients from an Indian cohort. The next generation sequencing was carried out in five clinically confirmed unrelated patients and their family members using a gene panel comprising 184 retinal specific genes. Sequencing results were analyzed by read mapping and variant calling in genes of interest, followed by their verification and interpretation. Genetic analysis revealed ABCA4 mutations in all of the five unrelated patients. Among these, four patients were found with compound heterozygous mutations and another one had homozygous mutation. All the affected individuals showed signs and symptoms consistent with the disease phenotype. We report two novel ABCA4 mutations in Indian patients with STGD disease, which expands the existing spectrum of disease-causing variants and the understanding of phenotypic and genotypic correlations. Screening for causative mutations in patients with STGD using panel of targeted gene sequencing by NGS would be a cost effective tool, might be helpful in confirming the precise diagnosis, and contributes towards the genetic counselling of asymptomatic carriers and isolated patients. Hindawi Publishing Corporation 2015 2015-04-02 /pmc/articles/PMC4398921/ /pubmed/25922843 http://dx.doi.org/10.1155/2015/940864 Text en Copyright © 2015 Rajani Battu et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Battu, Rajani
Verma, Anshuman
Hariharan, Ramesh
Krishna, Shuba
Kiran, Ravi
Jacob, Jemima
Ganapathy, Aparna
Ramprasad, Vedam L.
Kumaramanickavel, Govindasamy
Jeyabalan, Nallathambi
Ghosh, Arkasubhra
Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease
title Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease
title_full Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease
title_fullStr Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease
title_full_unstemmed Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease
title_short Identification of Novel Mutations in ABCA4 Gene: Clinical and Genetic Analysis of Indian Patients with Stargardt Disease
title_sort identification of novel mutations in abca4 gene: clinical and genetic analysis of indian patients with stargardt disease
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4398921/
https://www.ncbi.nlm.nih.gov/pubmed/25922843
http://dx.doi.org/10.1155/2015/940864
work_keys_str_mv AT batturajani identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT vermaanshuman identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT hariharanramesh identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT krishnashuba identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT kiranravi identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT jacobjemima identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT ganapathyaparna identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT ramprasadvedaml identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT kumaramanickavelgovindasamy identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT jeyabalannallathambi identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease
AT ghosharkasubhra identificationofnovelmutationsinabca4geneclinicalandgeneticanalysisofindianpatientswithstargardtdisease