Cargando…

Survey of genome sequences in a wild sweet potato, Ipomoea trifida (H. B. K.) G. Don

Ipomoea trifida (H. B. K.) G. Don. is the most likely diploid ancestor of the hexaploid sweet potato, I. batatas (L.) Lam. To assist in analysis of the sweet potato genome, de novo whole-genome sequencing was performed with two lines of I. trifida, namely the selfed line Mx23Hm and the highly hetero...

Descripción completa

Detalles Bibliográficos
Autores principales:	Hirakawa, Hideki, Okada, Yoshihiro, Tabuchi, Hiroaki, Shirasawa, Kenta, Watanabe, Akiko, Tsuruoka, Hisano, Minami, Chiharu, Nakayama, Shinobu, Sasamoto, Shigemi, Kohara, Mitsuyo, Kishida, Yoshie, Fujishiro, Tsunakazu, Kato, Midori, Nanri, Keiko, Komaki, Akiko, Yoshinaga, Masaru, Takahata, Yasuhiro, Tanaka, Masaru, Tabata, Satoshi, Isobe, Sachiko N.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2015
Materias:	Full Papers
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4401327/ https://www.ncbi.nlm.nih.gov/pubmed/25805887 http://dx.doi.org/10.1093/dnares/dsv002

Ejemplares similares

Development of EST-SSR markers and construction of a linkage map in faba bean (Vicia faba)
por: El-Rodeny, Walid, et al.
Publicado: (2014)

Comparative Genetic Mapping and Discovery of Linkage Disequilibrium Across Linkage Groups in White Clover (Trifolium repens L.)
por: Isobe, Sachiko N., et al.
Publicado: (2012)

Dissection of the Octoploid Strawberry Genome by Deep Sequencing of the Genomes of Fragaria Species
por: Hirakawa, Hideki, et al.
Publicado: (2014)

Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis in Arachis spp.
por: Koilkonda, Padmalatha, et al.
Publicado: (2011)

SNP Discovery and Linkage Map Construction in Cultivated Tomato
por: Shirasawa, Kenta, et al.
Publicado: (2010)

Construction of an Integrated High Density Simple Sequence Repeat Linkage Map in Cultivated Strawberry (Fragaria × ananassa) and its Applicability
por: Isobe, Sachiko N., et al.
Publicado: (2013)

An EST-SSR Linkage Map of Raphanus sativus and Comparative Genomics of the Brassicaceae(†)
por: Shirasawa, Kenta, et al.
Publicado: (2011)

An interspecific linkage map of SSR and intronic polymorphism markers in tomato
por: Shirasawa, Kenta, et al.
Publicado: (2010)

Identification of QTLs for root color and carotenoid contents in Japanese orange carrot F(2) populations
por: Shibaya, Taeko, et al.
Publicado: (2022)

In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut
por: Shirasawa, Kenta, et al.
Publicado: (2012)

Genome Structure of the Legume, Lotus japonicus
por: Sato, Shusei, et al.
Publicado: (2008)

Characterization of active miniature inverted-repeat transposable elements in the peanut genome
por: Shirasawa, Kenta, et al.
Publicado: (2012)

The wild sweetpotato (Ipomoea trifida) genome provides insights into storage root development
por: Li, Ming, et al.
Publicado: (2019)

Complete Genomic Structure of the Bloom-forming Toxic Cyanobacterium Microcystis aeruginosa NIES-843
por: Kaneko, Takakazu, et al.
Publicado: (2007)

Identification and expression analysis of GRAS transcription factors in the wild relative of sweet potato Ipomoea trifida
por: Chen, Yao, et al.
Publicado: (2019)

Sequence Analysis of the Genome of an Oil-Bearing Tree, Jatropha curcas L.
por: Sato, Shusei, et al.
Publicado: (2011)

Plant GARDEN: a portal website for cross-searching between different types of genomic and genetic resources in a wide variety of plant species
por: Ichihara, Hisako, et al.
Publicado: (2023)

Comparative analysis of the root transcriptomes of cultivated sweetpotato (Ipomoea batatas [L.] Lam) and its wild ancestor (Ipomoea trifida [Kunth] G. Don)
por: Ponniah, Sathish K., et al.
Publicado: (2017)

Characterization of the Soybean Genome Using EST-derived Microsatellite Markers
por: Hisano, Hiroshi, et al.
Publicado: (2007)

QTL analysis and GWAS of agronomic traits in sweetpotato (Ipomoea batatas L.) using genome wide SNPs
por: Haque, Emdadul, et al.
Publicado: (2020)

CyanoBase: the cyanobacteria genome database update 2010
por: Nakao, Mitsuteru, et al.
Publicado: (2010)

Current status in whole genome sequencing and analysis of Ipomoea spp.
por: Isobe, Sachiko, et al.
Publicado: (2019)

Complete Genomic Structure of the Cultivated Rice Endophyte Azospirillum sp. B510
por: Kaneko, Takakazu, et al.
Publicado: (2010)

A Novel WRKY Transcription Factor from Ipomoea trifida, ItfWRKY70, Confers Drought Tolerance in Sweet Potato
por: Sun, Sifan, et al.
Publicado: (2022)

Genome-wide identification and characterization of NBS-encoding genes in the sweet potato wild ancestor Ipomoea trifida (H.B.K.)
por: Si, Zengzhi, et al.
Publicado: (2022)

Genome-Wide Identification and Expression Analysis of Expansin Gene Family in the Storage Root Development of Diploid Wild Sweetpotato Ipomoea trifida
por: Li, Ming, et al.
Publicado: (2022)

A high-density SNP genetic map consisting of a complete set of homologous groups in autohexaploid sweetpotato (Ipomoea batatas)
por: Shirasawa, Kenta, et al.
Publicado: (2017)

Genome-wide identification, structural and gene expression analysis of the bZIP transcription factor family in sweet potato wild relative Ipomoea trifida
por: Yang, Zhengmei, et al.
Publicado: (2019)

On a Remedy (the Ambrosia Trifida) for Mercurial Salivation
por: Robertson, Wm.
Publicado: (1846)

Root-zone-specific sensitivity of K(+)-and Ca(2+)-permeable channels to H(2)O(2) determines ion homeostasis in salinized diploid and hexaploid Ipomoea trifida
por: Liu, Yang, et al.
Publicado: (2019)

Genome-wide identification, characterisation and functional evaluation of WRKY genes in the sweet potato wild ancestor Ipomoea trifida (H.B.K.) G. Don. under abiotic stresses
por: Li, Yuxia, et al.
Publicado: (2019)

Development of chloroplast microsatellite markers for giant ragweed (Ambrosia trifida)
por: Sharma, Himanshu, et al.
Publicado: (2020)

Sequence Analysis of the Genome of Carnation (Dianthus caryophyllus L.)
por: Yagi, Masafumi, et al.
Publicado: (2014)

Chemical Composition of Ambrosia trifida L. and Its Allelopathic Influence on Crops
por: Šućur, Jovana, et al.
Publicado: (2021)

Autotoxicity of Ambrosia artemisiifolia and Ambrosia trifida and its significance for the regulation of intraspecific populations density
por: Su, Pei, et al.
Publicado: (2022)

A Large-scale Protein–protein Interaction Analysis in Synechocystis sp. PCC6803
por: Sato, Shusei, et al.
Publicado: (2007)

Sequencing the Plastid Genome of Giant Ragweed (Ambrosia trifida, Asteraceae) From a Herbarium Specimen
por: Sablok, Gaurav, et al.
Publicado: (2019)

Causes of differences in the distribution of the invasive plants Ambrosia artemisiifolia and Ambrosia trifida in the Yili Valley, China
por: Dong, Hegan, et al.
Publicado: (2020)

Nitrogen deposition further increases Ambrosia trifida root exudate invasiveness under global warming
por: Xu, Ke, et al.
Publicado: (2023)

Nutritional Epidemiology of Type 2 Diabetes and Depressive Symptoms
por: Nanri, Akiko
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_benuu8or23dd3hek3kep65irvd