Cargando…

EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples

EPA Method 1615 was developed with a goal of providing a standard method for measuring enteroviruses and noroviruses in environmental and drinking waters. The standardized sampling component of the method concentrates viruses that may be present in water by passage of a minimum specified volume of w...

Descripción completa

Detalles Bibliográficos
Autores principales: Fout, G. Shay, Cashdollar, Jennifer L., Varughese, Eunice A., Parshionikar, Sandhya U., Grimm, Ann C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MyJove Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4401389/
https://www.ncbi.nlm.nih.gov/pubmed/25867928
http://dx.doi.org/10.3791/52067
_version_ 1782367140245929984
author Fout, G. Shay
Cashdollar, Jennifer L.
Varughese, Eunice A.
Parshionikar, Sandhya U.
Grimm, Ann C.
author_facet Fout, G. Shay
Cashdollar, Jennifer L.
Varughese, Eunice A.
Parshionikar, Sandhya U.
Grimm, Ann C.
author_sort Fout, G. Shay
collection PubMed
description EPA Method 1615 was developed with a goal of providing a standard method for measuring enteroviruses and noroviruses in environmental and drinking waters. The standardized sampling component of the method concentrates viruses that may be present in water by passage of a minimum specified volume of water through an electropositive cartridge filter. The minimum specified volumes for surface and finished/ground water are 300 L and 1,500 L, respectively. A major method limitation is the tendency for the filters to clog before meeting the sample volume requirement. Studies using two different, but equivalent, cartridge filter options showed that filter clogging was a problem with 10% of the samples with one of the filter types compared to 6% with the other filter type. Clogging tends to increase with turbidity, but cannot be predicted based on turbidity measurements only. From a cost standpoint one of the filter options is preferable over the other, but the water quality and experience with the water system to be sampled should be taken into consideration in making filter selections.
format Online
Article
Text
id pubmed-4401389
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher MyJove Corporation
record_format MEDLINE/PubMed
spelling pubmed-44013892015-04-24 EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples Fout, G. Shay Cashdollar, Jennifer L. Varughese, Eunice A. Parshionikar, Sandhya U. Grimm, Ann C. J Vis Exp Environmental Sciences EPA Method 1615 was developed with a goal of providing a standard method for measuring enteroviruses and noroviruses in environmental and drinking waters. The standardized sampling component of the method concentrates viruses that may be present in water by passage of a minimum specified volume of water through an electropositive cartridge filter. The minimum specified volumes for surface and finished/ground water are 300 L and 1,500 L, respectively. A major method limitation is the tendency for the filters to clog before meeting the sample volume requirement. Studies using two different, but equivalent, cartridge filter options showed that filter clogging was a problem with 10% of the samples with one of the filter types compared to 6% with the other filter type. Clogging tends to increase with turbidity, but cannot be predicted based on turbidity measurements only. From a cost standpoint one of the filter options is preferable over the other, but the water quality and experience with the water system to be sampled should be taken into consideration in making filter selections. MyJove Corporation 2015-03-28 /pmc/articles/PMC4401389/ /pubmed/25867928 http://dx.doi.org/10.3791/52067 Text en Copyright © 2015, Journal of Visualized Experiments http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visithttp://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Environmental Sciences
Fout, G. Shay
Cashdollar, Jennifer L.
Varughese, Eunice A.
Parshionikar, Sandhya U.
Grimm, Ann C.
EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples
title EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples
title_full EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples
title_fullStr EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples
title_full_unstemmed EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples
title_short EPA Method 1615. Measurement of Enterovirus and Norovirus Occurrence in Water by Culture and RT-qPCR. I. Collection of Virus Samples
title_sort epa method 1615. measurement of enterovirus and norovirus occurrence in water by culture and rt-qpcr. i. collection of virus samples
topic Environmental Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4401389/
https://www.ncbi.nlm.nih.gov/pubmed/25867928
http://dx.doi.org/10.3791/52067
work_keys_str_mv AT foutgshay epamethod1615measurementofenterovirusandnorovirusoccurrenceinwaterbycultureandrtqpcricollectionofvirussamples
AT cashdollarjenniferl epamethod1615measurementofenterovirusandnorovirusoccurrenceinwaterbycultureandrtqpcricollectionofvirussamples
AT varugheseeunicea epamethod1615measurementofenterovirusandnorovirusoccurrenceinwaterbycultureandrtqpcricollectionofvirussamples
AT parshionikarsandhyau epamethod1615measurementofenterovirusandnorovirusoccurrenceinwaterbycultureandrtqpcricollectionofvirussamples
AT grimmannc epamethod1615measurementofenterovirusandnorovirusoccurrenceinwaterbycultureandrtqpcricollectionofvirussamples