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A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining

The fungus Pseudozyma antarctica produces a lipase (CalB) with broad substrate specificity, stability, high regio- and enantio-selectivity. It is active in non-aqueous organic solvents and at elevated temperatures. Hence, CalB is a robust biocatalyst for chemical conversions on an industrial scale....

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Detalles Bibliográficos
Autores principales: Vaquero, Maria E., de Eugenio, Laura I., Martínez, Maria J., Barriuso, Jorge
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4405274/
https://www.ncbi.nlm.nih.gov/pubmed/25898146
http://dx.doi.org/10.1371/journal.pone.0124882
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author Vaquero, Maria E.
de Eugenio, Laura I.
Martínez, Maria J.
Barriuso, Jorge
author_facet Vaquero, Maria E.
de Eugenio, Laura I.
Martínez, Maria J.
Barriuso, Jorge
author_sort Vaquero, Maria E.
collection PubMed
description The fungus Pseudozyma antarctica produces a lipase (CalB) with broad substrate specificity, stability, high regio- and enantio-selectivity. It is active in non-aqueous organic solvents and at elevated temperatures. Hence, CalB is a robust biocatalyst for chemical conversions on an industrial scale. Here we report the in silico mining of public metagenomes and fungal genomes to discover novel lipases with high homology to CalB. The candidates were selected taking into account homology and conserved motifs criteria, as well as, phylogeny and 3D model analyses. The most promising candidate (PlicB) presented interesting structural properties. PlicB was expressed in a heterologous host, purified and partially characterized. Further experiments will allow finding novel catalytic properties with biotechnological interest.
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spelling pubmed-44052742015-05-07 A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining Vaquero, Maria E. de Eugenio, Laura I. Martínez, Maria J. Barriuso, Jorge PLoS One Research Article The fungus Pseudozyma antarctica produces a lipase (CalB) with broad substrate specificity, stability, high regio- and enantio-selectivity. It is active in non-aqueous organic solvents and at elevated temperatures. Hence, CalB is a robust biocatalyst for chemical conversions on an industrial scale. Here we report the in silico mining of public metagenomes and fungal genomes to discover novel lipases with high homology to CalB. The candidates were selected taking into account homology and conserved motifs criteria, as well as, phylogeny and 3D model analyses. The most promising candidate (PlicB) presented interesting structural properties. PlicB was expressed in a heterologous host, purified and partially characterized. Further experiments will allow finding novel catalytic properties with biotechnological interest. Public Library of Science 2015-04-21 /pmc/articles/PMC4405274/ /pubmed/25898146 http://dx.doi.org/10.1371/journal.pone.0124882 Text en © 2015 Vaquero et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Vaquero, Maria E.
de Eugenio, Laura I.
Martínez, Maria J.
Barriuso, Jorge
A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining
title A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining
title_full A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining
title_fullStr A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining
title_full_unstemmed A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining
title_short A Novel CalB-Type Lipase Discovered by Fungal Genomes Mining
title_sort novel calb-type lipase discovered by fungal genomes mining
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4405274/
https://www.ncbi.nlm.nih.gov/pubmed/25898146
http://dx.doi.org/10.1371/journal.pone.0124882
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