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Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera

BACKGROUND: Sterol glycosyltransferases (SGTs) are ubiquitous but one of the most diverse group of enzymes of glycosyltransferases family. Members of this family modulate physical and chemical properties of secondary plant products important for various physiological processes. The role of SGTs has...

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Autores principales: Pandey, Vibha, Dhar, Yogeshwar Vikram, Gupta, Parul, Bag, Sumit K, Atri, Neelam, Asif, Mehar Hasan, Trivedi, Prabodh Kumar, Misra, Pratibha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4407318/
https://www.ncbi.nlm.nih.gov/pubmed/25888493
http://dx.doi.org/10.1186/s12859-015-0563-7
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author Pandey, Vibha
Dhar, Yogeshwar Vikram
Gupta, Parul
Bag, Sumit K
Atri, Neelam
Asif, Mehar Hasan
Trivedi, Prabodh Kumar
Misra, Pratibha
author_facet Pandey, Vibha
Dhar, Yogeshwar Vikram
Gupta, Parul
Bag, Sumit K
Atri, Neelam
Asif, Mehar Hasan
Trivedi, Prabodh Kumar
Misra, Pratibha
author_sort Pandey, Vibha
collection PubMed
description BACKGROUND: Sterol glycosyltransferases (SGTs) are ubiquitous but one of the most diverse group of enzymes of glycosyltransferases family. Members of this family modulate physical and chemical properties of secondary plant products important for various physiological processes. The role of SGTs has been demonstrated in the biosynthesis of pharmaceutically important molecules of medicinal plants like Withania somnifera. RESULTS: Analysis suggested conserved behaviour and high similarity in active sites of WsSGTs with other plant GTs. Substrate specificity of WsSGTs were analysed through docking performance of WsSGTs with different substrates (sterols and withanolides). Best docking results of WsSGTL1 in the form of stable enzyme-substrate complex having lowest binding energies were obtained with brassicasterol, transandrosteron and WsSGTL4 with solasodine, stigmasterol and 24-methylene cholesterol. CONCLUSION: This study reveals topological characters and conserved nature of two SGTs from W. somnifera (WsSGTs) i.e. WsSGTL1 and WsSGTL4. However, besides being ubiquitous in nature and with broad substrate specificity, difference between WsSGTL1 and WsSGTL4 is briefly described by difference in stability (binding energy) of enzyme-substrate complexes through comparative docking. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12859-015-0563-7) contains supplementary material, which is available to authorized users.
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spelling pubmed-44073182015-04-24 Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera Pandey, Vibha Dhar, Yogeshwar Vikram Gupta, Parul Bag, Sumit K Atri, Neelam Asif, Mehar Hasan Trivedi, Prabodh Kumar Misra, Pratibha BMC Bioinformatics Research Article BACKGROUND: Sterol glycosyltransferases (SGTs) are ubiquitous but one of the most diverse group of enzymes of glycosyltransferases family. Members of this family modulate physical and chemical properties of secondary plant products important for various physiological processes. The role of SGTs has been demonstrated in the biosynthesis of pharmaceutically important molecules of medicinal plants like Withania somnifera. RESULTS: Analysis suggested conserved behaviour and high similarity in active sites of WsSGTs with other plant GTs. Substrate specificity of WsSGTs were analysed through docking performance of WsSGTs with different substrates (sterols and withanolides). Best docking results of WsSGTL1 in the form of stable enzyme-substrate complex having lowest binding energies were obtained with brassicasterol, transandrosteron and WsSGTL4 with solasodine, stigmasterol and 24-methylene cholesterol. CONCLUSION: This study reveals topological characters and conserved nature of two SGTs from W. somnifera (WsSGTs) i.e. WsSGTL1 and WsSGTL4. However, besides being ubiquitous in nature and with broad substrate specificity, difference between WsSGTL1 and WsSGTL4 is briefly described by difference in stability (binding energy) of enzyme-substrate complexes through comparative docking. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12859-015-0563-7) contains supplementary material, which is available to authorized users. BioMed Central 2015-04-16 /pmc/articles/PMC4407318/ /pubmed/25888493 http://dx.doi.org/10.1186/s12859-015-0563-7 Text en © Pandey et al.; licensee BioMed Central. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Pandey, Vibha
Dhar, Yogeshwar Vikram
Gupta, Parul
Bag, Sumit K
Atri, Neelam
Asif, Mehar Hasan
Trivedi, Prabodh Kumar
Misra, Pratibha
Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera
title Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera
title_full Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera
title_fullStr Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera
title_full_unstemmed Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera
title_short Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera
title_sort comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from withania somnifera
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4407318/
https://www.ncbi.nlm.nih.gov/pubmed/25888493
http://dx.doi.org/10.1186/s12859-015-0563-7
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