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Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera
BACKGROUND: Sterol glycosyltransferases (SGTs) are ubiquitous but one of the most diverse group of enzymes of glycosyltransferases family. Members of this family modulate physical and chemical properties of secondary plant products important for various physiological processes. The role of SGTs has...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4407318/ https://www.ncbi.nlm.nih.gov/pubmed/25888493 http://dx.doi.org/10.1186/s12859-015-0563-7 |
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author | Pandey, Vibha Dhar, Yogeshwar Vikram Gupta, Parul Bag, Sumit K Atri, Neelam Asif, Mehar Hasan Trivedi, Prabodh Kumar Misra, Pratibha |
author_facet | Pandey, Vibha Dhar, Yogeshwar Vikram Gupta, Parul Bag, Sumit K Atri, Neelam Asif, Mehar Hasan Trivedi, Prabodh Kumar Misra, Pratibha |
author_sort | Pandey, Vibha |
collection | PubMed |
description | BACKGROUND: Sterol glycosyltransferases (SGTs) are ubiquitous but one of the most diverse group of enzymes of glycosyltransferases family. Members of this family modulate physical and chemical properties of secondary plant products important for various physiological processes. The role of SGTs has been demonstrated in the biosynthesis of pharmaceutically important molecules of medicinal plants like Withania somnifera. RESULTS: Analysis suggested conserved behaviour and high similarity in active sites of WsSGTs with other plant GTs. Substrate specificity of WsSGTs were analysed through docking performance of WsSGTs with different substrates (sterols and withanolides). Best docking results of WsSGTL1 in the form of stable enzyme-substrate complex having lowest binding energies were obtained with brassicasterol, transandrosteron and WsSGTL4 with solasodine, stigmasterol and 24-methylene cholesterol. CONCLUSION: This study reveals topological characters and conserved nature of two SGTs from W. somnifera (WsSGTs) i.e. WsSGTL1 and WsSGTL4. However, besides being ubiquitous in nature and with broad substrate specificity, difference between WsSGTL1 and WsSGTL4 is briefly described by difference in stability (binding energy) of enzyme-substrate complexes through comparative docking. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12859-015-0563-7) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4407318 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-44073182015-04-24 Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera Pandey, Vibha Dhar, Yogeshwar Vikram Gupta, Parul Bag, Sumit K Atri, Neelam Asif, Mehar Hasan Trivedi, Prabodh Kumar Misra, Pratibha BMC Bioinformatics Research Article BACKGROUND: Sterol glycosyltransferases (SGTs) are ubiquitous but one of the most diverse group of enzymes of glycosyltransferases family. Members of this family modulate physical and chemical properties of secondary plant products important for various physiological processes. The role of SGTs has been demonstrated in the biosynthesis of pharmaceutically important molecules of medicinal plants like Withania somnifera. RESULTS: Analysis suggested conserved behaviour and high similarity in active sites of WsSGTs with other plant GTs. Substrate specificity of WsSGTs were analysed through docking performance of WsSGTs with different substrates (sterols and withanolides). Best docking results of WsSGTL1 in the form of stable enzyme-substrate complex having lowest binding energies were obtained with brassicasterol, transandrosteron and WsSGTL4 with solasodine, stigmasterol and 24-methylene cholesterol. CONCLUSION: This study reveals topological characters and conserved nature of two SGTs from W. somnifera (WsSGTs) i.e. WsSGTL1 and WsSGTL4. However, besides being ubiquitous in nature and with broad substrate specificity, difference between WsSGTL1 and WsSGTL4 is briefly described by difference in stability (binding energy) of enzyme-substrate complexes through comparative docking. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12859-015-0563-7) contains supplementary material, which is available to authorized users. BioMed Central 2015-04-16 /pmc/articles/PMC4407318/ /pubmed/25888493 http://dx.doi.org/10.1186/s12859-015-0563-7 Text en © Pandey et al.; licensee BioMed Central. 2015 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Pandey, Vibha Dhar, Yogeshwar Vikram Gupta, Parul Bag, Sumit K Atri, Neelam Asif, Mehar Hasan Trivedi, Prabodh Kumar Misra, Pratibha Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera |
title | Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera |
title_full | Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera |
title_fullStr | Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera |
title_full_unstemmed | Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera |
title_short | Comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from Withania somnifera |
title_sort | comparative interactions of withanolides and sterols with two members of sterol glycosyltransferases from withania somnifera |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4407318/ https://www.ncbi.nlm.nih.gov/pubmed/25888493 http://dx.doi.org/10.1186/s12859-015-0563-7 |
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