Cargando…

Guanine quadruplexes are formed by specific regions of human transposable elements

BACKGROUND: Transposable elements form a significant proportion of eukaryotic genomes. Recently, Lexa et al. (Nucleic Acids Res 42:968-978, 2014) reported that plant long terminal repeat (LTR) retrotransposons often contain potential quadruplex sequences (PQSs) in their LTRs and experimentally confi...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lexa, Matej, Steflova, Pavlina, Martinek, Tomas, Vorlickova, Michaela, Vyskot, Boris, Kejnovsky, Eduard
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4407331/ https://www.ncbi.nlm.nih.gov/pubmed/25431265 http://dx.doi.org/10.1186/1471-2164-15-1032

Ejemplares similares

Quadruplex-forming sequences occupy discrete regions inside plant LTR retrotransposons
por: Lexa, Matej, et al.
Publicado: (2014)

Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY(1)Y(2)) in the Dioecious Plant Rumex acetosa
por: Steflova, Pavlina, et al.
Publicado: (2013)

Diversity of Parallel Guanine Quadruplexes Induced by Guanine Substitutions
por: Bednářová, Klára, et al.
Publicado: (2020)

Quadruplex DNA in long terminal repeats in maize LTR retrotransposons inhibits the expression of a reporter gene in yeast
por: Tokan, Viktor, et al.
Publicado: (2018)

Expansion of Microsatellites on Evolutionary Young Y Chromosome
por: Kejnovský, Eduard, et al.
Publicado: (2013)

Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study
por: Jedlicka, Pavel, et al.
Publicado: (2019)

Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study
por: Jedlicka, Pavel, et al.
Publicado: (2020)

Satellite DNA and Transposable Elements in Seabuckthorn (Hippophae rhamnoides), a Dioecious Plant with Small Y and Large X Chromosomes
por: Puterova, Janka, et al.
Publicado: (2017)

Impact of Repetitive Elements on the Y Chromosome Formation in Plants
por: Hobza, Roman, et al.
Publicado: (2017)

What Can Long Terminal Repeats Tell Us About the Age of LTR Retrotransposons, Gene Conversion and Ectopic Recombination?
por: Jedlicka, Pavel, et al.
Publicado: (2020)

Telomeric retrotransposons show propensity to form G-quadruplexes in various eukaryotic species
por: Jedlička, Pavel, et al.
Publicado: (2023)

Fully automated pipeline for detection of sex linked genes using RNA-Seq data
por: Michalovova, Monika, et al.
Publicado: (2015)

TE-greedy-nester: structure-based detection of LTR retrotransposons and their nesting
por: Lexa, Matej, et al.
Publicado: (2020)

Structural Polymorphism of Guanine Quadruplex-Containing Regions in Human Promoters
por: Hennecker, Christopher, et al.
Publicado: (2022)

Guanine quadruplexes in the RNA genome of the tick-borne encephalitis virus: their role as a new antiviral target and in virus biology
por: Holoubek, Jiří, et al.
Publicado: (2022)

Guanine quadruplex structures localize to heterochromatin
por: Hoffmann, Roland F., et al.
Publicado: (2016)

Guanine quadruplex structures localize to heterochromatin
por: Hoffmann, Roland F., et al.
Publicado: (2017)

The slowdown of Y chromosome expansion in dioecious Silene latifolia due to DNA loss and male-specific silencing of retrotransposons
por: Puterova, Janka, et al.
Publicado: (2018)

Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia
por: Macas, Jiří, et al.
Publicado: (2011)

Correction: Next Generation Sequencing-Based Analysis of Repetitive DNA in the Model Dioceous Plant Silene latifolia
por: Macas, Jiří, et al.
Publicado: (2011)

Guanine tetraplex topology of human telomere DNA is governed by the number of (TTAGGG) repeats
por: Vorlíčková, Michaela, et al.
Publicado: (2005)

Mapping the sequences of potential guanine quadruplex motifs
por: Todd, Alan K., et al.
Publicado: (2011)

G-Quadruplexes: From Guanine Gels to Chemotherapeutics
por: Bryan, Tracy M., et al.
Publicado: (2011)

G-register exchange dynamics in guanine quadruplexes
por: Harkness, Robert W., et al.
Publicado: (2016)

Frustrated folding of guanine quadruplexes in telomeric DNA
por: Carrino, Simone, et al.
Publicado: (2021)

Quadruplex-Forming Motif Inserted into 3′UTR of Ty1his3-AI Retrotransposon Inhibits Retrotransposition in Yeast
por: Tokan, Viktor, et al.
Publicado: (2021)

Guanine base stacking in G-quadruplex nucleic acids
por: Lech, Christopher Jacques, et al.
Publicado: (2013)

Identification and characterization of RNA guanine-quadruplex binding proteins
por: von Hacht, Annekathrin, et al.
Publicado: (2014)

Guanine quadruplexes mediate mitochondrial RNA polymerase pausing
por: Snyder, Ryan, et al.
Publicado: (2023)

Wild-type p53 binds to MYC promoter G-quadruplex
por: Petr, Marek, et al.
Publicado: (2016)

Design and Properties of Ligand-Conjugated Guanine Oligonucleotides for Recovery of Mutated G-Quadruplexes
por: Takahashi, Shuntaro, et al.
Publicado: (2018)

Polymorphism of human telomeric quadruplex structure controlled by DNA concentration: a Raman study
por: Palacký, Jan, et al.
Publicado: (2013)

Human DDX21 binds and unwinds RNA guanine quadruplexes
por: McRae, Ewan K.S., et al.
Publicado: (2017)

Parallel reaction pathways accelerate folding of a guanine quadruplex
por: Harkness, Robert W, et al.
Publicado: (2021)

Phase Separation Modulates the Formation and Stabilities of DNA Guanine Quadruplex
por: Gao, Zi, et al.
Publicado: (2023)

Products of Oxidative Guanine Damage Form Base Pairs with Guanine
por: Kino, Katsuhito, et al.
Publicado: (2020)

Genomic Diversity in Two Related Plant Species with and without Sex Chromosomes - Silene latifolia and S. vulgaris
por: Cegan, Radim, et al.
Publicado: (2012)

On Characterizing the Interactions between Proteins and Guanine Quadruplex Structures of Nucleic Acids
por: McRae, Ewan K. S., et al.
Publicado: (2017)

Mutagenesis Reveals an Unusual Combination of Guanines in RNA G-Quadruplex Formation
por: Agarwala, Prachi, et al.
Publicado: (2017)

Rapid and simple G-quadruplex DNA aptasensor with guanine chemiluminescence detection
por: Cho, Sandy, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_qor4hn9mjd238jtv3v0hmdnoan