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Estimation of Noise-Free Variance to Measure Heterogeneity

Variance is a statistical parameter used to characterize heterogeneity or variability in data sets. However, measurements commonly include noise, as random errors superimposed to the actual value, which may substantially increase the variance compared to a noise-free data set. Our aim was to develop...

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Autores principales: Winkler, Tilo, Melo, Marcos F. Vidal, Degani-Costa, Luiza H., Harris, R. Scott, Correia, John A., Musch, Guido, Venegas, Jose G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408041/
https://www.ncbi.nlm.nih.gov/pubmed/25906374
http://dx.doi.org/10.1371/journal.pone.0123417
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author Winkler, Tilo
Melo, Marcos F. Vidal
Degani-Costa, Luiza H.
Harris, R. Scott
Correia, John A.
Musch, Guido
Venegas, Jose G.
author_facet Winkler, Tilo
Melo, Marcos F. Vidal
Degani-Costa, Luiza H.
Harris, R. Scott
Correia, John A.
Musch, Guido
Venegas, Jose G.
author_sort Winkler, Tilo
collection PubMed
description Variance is a statistical parameter used to characterize heterogeneity or variability in data sets. However, measurements commonly include noise, as random errors superimposed to the actual value, which may substantially increase the variance compared to a noise-free data set. Our aim was to develop and validate a method to estimate noise-free spatial heterogeneity of pulmonary perfusion using dynamic positron emission tomography (PET) scans. On theoretical grounds, we demonstrate a linear relationship between the total variance of a data set derived from averages of n multiple measurements, and the reciprocal of n. Using multiple measurements with varying n yields estimates of the linear relationship including the noise-free variance as the constant parameter. In PET images, n is proportional to the number of registered decay events, and the variance of the image is typically normalized by the square of its mean value yielding a coefficient of variation squared (CV (2)). The method was evaluated with a Jaszczak phantom as reference spatial heterogeneity (CV(r) (2)) for comparison with our estimate of noise-free or ‘true’ heterogeneity (CV (t) (2)). We found that CV (t) (2) was only 5.4% higher than CV (r) (2). Additional evaluations were conducted on 38 PET scans of pulmonary perfusion using (13)NN-saline injection. The mean CV (t) (2) was 0.10 (range: 0.03–0.30), while the mean CV (2) including noise was 0.24 (range: 0.10–0.59). CV (t) (2) was in average 41.5% of the CV (2) measured including noise (range: 17.8–71.2%). The reproducibility of CV (t) (2) was evaluated using three repeated PET scans from five subjects. Individual CV (t) (2) were within 16% of each subject's mean and paired t-tests revealed no difference among the results from the three consecutive PET scans. In conclusion, our method provides reliable noise-free estimates of CV (t) (2) in PET scans, and may be useful for similar statistical problems in experimental data.
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spelling pubmed-44080412015-05-04 Estimation of Noise-Free Variance to Measure Heterogeneity Winkler, Tilo Melo, Marcos F. Vidal Degani-Costa, Luiza H. Harris, R. Scott Correia, John A. Musch, Guido Venegas, Jose G. PLoS One Research Article Variance is a statistical parameter used to characterize heterogeneity or variability in data sets. However, measurements commonly include noise, as random errors superimposed to the actual value, which may substantially increase the variance compared to a noise-free data set. Our aim was to develop and validate a method to estimate noise-free spatial heterogeneity of pulmonary perfusion using dynamic positron emission tomography (PET) scans. On theoretical grounds, we demonstrate a linear relationship between the total variance of a data set derived from averages of n multiple measurements, and the reciprocal of n. Using multiple measurements with varying n yields estimates of the linear relationship including the noise-free variance as the constant parameter. In PET images, n is proportional to the number of registered decay events, and the variance of the image is typically normalized by the square of its mean value yielding a coefficient of variation squared (CV (2)). The method was evaluated with a Jaszczak phantom as reference spatial heterogeneity (CV(r) (2)) for comparison with our estimate of noise-free or ‘true’ heterogeneity (CV (t) (2)). We found that CV (t) (2) was only 5.4% higher than CV (r) (2). Additional evaluations were conducted on 38 PET scans of pulmonary perfusion using (13)NN-saline injection. The mean CV (t) (2) was 0.10 (range: 0.03–0.30), while the mean CV (2) including noise was 0.24 (range: 0.10–0.59). CV (t) (2) was in average 41.5% of the CV (2) measured including noise (range: 17.8–71.2%). The reproducibility of CV (t) (2) was evaluated using three repeated PET scans from five subjects. Individual CV (t) (2) were within 16% of each subject's mean and paired t-tests revealed no difference among the results from the three consecutive PET scans. In conclusion, our method provides reliable noise-free estimates of CV (t) (2) in PET scans, and may be useful for similar statistical problems in experimental data. Public Library of Science 2015-04-23 /pmc/articles/PMC4408041/ /pubmed/25906374 http://dx.doi.org/10.1371/journal.pone.0123417 Text en © 2015 Winkler et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Winkler, Tilo
Melo, Marcos F. Vidal
Degani-Costa, Luiza H.
Harris, R. Scott
Correia, John A.
Musch, Guido
Venegas, Jose G.
Estimation of Noise-Free Variance to Measure Heterogeneity
title Estimation of Noise-Free Variance to Measure Heterogeneity
title_full Estimation of Noise-Free Variance to Measure Heterogeneity
title_fullStr Estimation of Noise-Free Variance to Measure Heterogeneity
title_full_unstemmed Estimation of Noise-Free Variance to Measure Heterogeneity
title_short Estimation of Noise-Free Variance to Measure Heterogeneity
title_sort estimation of noise-free variance to measure heterogeneity
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408041/
https://www.ncbi.nlm.nih.gov/pubmed/25906374
http://dx.doi.org/10.1371/journal.pone.0123417
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