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A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors

The incorporation of microbial diversity in design would ideally require predictive theory that would relate operational parameters to the numbers and distribution of taxa. Resource ratio-theory (RRT) might be one such theory. Based on Monod kinetics, it explains diversity in function of resource-ra...

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Autores principales: Bellucci, Micol, Ofiţeru, Irina D, Beneduce, Luciano, Graham, David W, Head, Ian M, Curtis, Thomas P
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BlackWell Publishing Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408191/
https://www.ncbi.nlm.nih.gov/pubmed/25874592
http://dx.doi.org/10.1111/1751-7915.12284
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author Bellucci, Micol
Ofiţeru, Irina D
Beneduce, Luciano
Graham, David W
Head, Ian M
Curtis, Thomas P
author_facet Bellucci, Micol
Ofiţeru, Irina D
Beneduce, Luciano
Graham, David W
Head, Ian M
Curtis, Thomas P
author_sort Bellucci, Micol
collection PubMed
description The incorporation of microbial diversity in design would ideally require predictive theory that would relate operational parameters to the numbers and distribution of taxa. Resource ratio-theory (RRT) might be one such theory. Based on Monod kinetics, it explains diversity in function of resource-ratio and richness. However, to be usable in biological engineered system, the growth parameters of all the bacteria under consideration and the resource supply and diffusion parameters for all the relevant nutrients should be determined. This is challenging, but plausible, at least for low diversity groups with simple resource requirements like the ammonia oxidizing bacteria (AOB). One of the major successes of RRT was its ability to explain the ‘paradox of enrichment’ which states that diversity first increases and then decreases with resource richness. Here, we demonstrate that this pattern can be seen in lab-scale-activated sludge reactors and parallel simulations that incorporate the principles of RRT in a floc-based system. High and low ammonia and oxygen were supplied to continuous flow bioreactors with resource conditions correlating with the composition and diversity of resident AOB communities based on AOB 16S rDNA clone libraries. Neither the experimental work nor the simulations are definitive proof for the application of RRT in this context. However, it is sufficient evidence that such approach might work and justify a more rigorous investigation.
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spelling pubmed-44081912015-05-01 A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors Bellucci, Micol Ofiţeru, Irina D Beneduce, Luciano Graham, David W Head, Ian M Curtis, Thomas P Microb Biotechnol Research Articles The incorporation of microbial diversity in design would ideally require predictive theory that would relate operational parameters to the numbers and distribution of taxa. Resource ratio-theory (RRT) might be one such theory. Based on Monod kinetics, it explains diversity in function of resource-ratio and richness. However, to be usable in biological engineered system, the growth parameters of all the bacteria under consideration and the resource supply and diffusion parameters for all the relevant nutrients should be determined. This is challenging, but plausible, at least for low diversity groups with simple resource requirements like the ammonia oxidizing bacteria (AOB). One of the major successes of RRT was its ability to explain the ‘paradox of enrichment’ which states that diversity first increases and then decreases with resource richness. Here, we demonstrate that this pattern can be seen in lab-scale-activated sludge reactors and parallel simulations that incorporate the principles of RRT in a floc-based system. High and low ammonia and oxygen were supplied to continuous flow bioreactors with resource conditions correlating with the composition and diversity of resident AOB communities based on AOB 16S rDNA clone libraries. Neither the experimental work nor the simulations are definitive proof for the application of RRT in this context. However, it is sufficient evidence that such approach might work and justify a more rigorous investigation. BlackWell Publishing Ltd 2015-05 2015-04-15 /pmc/articles/PMC4408191/ /pubmed/25874592 http://dx.doi.org/10.1111/1751-7915.12284 Text en © 2015 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Bellucci, Micol
Ofiţeru, Irina D
Beneduce, Luciano
Graham, David W
Head, Ian M
Curtis, Thomas P
A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors
title A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors
title_full A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors
title_fullStr A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors
title_full_unstemmed A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors
title_short A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors
title_sort preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408191/
https://www.ncbi.nlm.nih.gov/pubmed/25874592
http://dx.doi.org/10.1111/1751-7915.12284
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