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Diagrammatic Analysis of Nonhomogeneous Diffusion
By virtue of its complexity, realistic approaches to describe diffusion in cellular media require the employment of computational methods. Among others, this type of studies has shown that the apparent diffusion coefficient of a macromolecular solute through a cytoplasmic-like medium exhibits a powe...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Hindawi Publishing Corporation
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408758/ https://www.ncbi.nlm.nih.gov/pubmed/25950014 http://dx.doi.org/10.1155/2014/150826 |
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author | Hernández, Julio A. |
author_facet | Hernández, Julio A. |
author_sort | Hernández, Julio A. |
collection | PubMed |
description | By virtue of its complexity, realistic approaches to describe diffusion in cellular media require the employment of computational methods. Among others, this type of studies has shown that the apparent diffusion coefficient of a macromolecular solute through a cytoplasmic-like medium exhibits a power-law dependence with the excluded volume. Power laws are ubiquitous findings in diverse systems, such as metabolic processes, population dynamics, and communication networks, and have been the object of many interpretative formal approaches. This study introduces a diagrammatic algorithm, inspired in previous ones employed to analyze multicyclic chemical systems, to derive expressions for nonhomogeneous diffusion coefficients and to study the effects of volume exclusion. A most noteworthy result of this work is that midsize diagrams of nonhomogeneous diffusion are already able to exhibit an approximate power-law dependence of the diffusion coefficient with the excluded volume. The employment of the diagrammatic method for the analysis of simple situations may thus prove useful to interpret some properties of larger network systems. |
format | Online Article Text |
id | pubmed-4408758 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-44087582015-05-06 Diagrammatic Analysis of Nonhomogeneous Diffusion Hernández, Julio A. ScientificWorldJournal Research Article By virtue of its complexity, realistic approaches to describe diffusion in cellular media require the employment of computational methods. Among others, this type of studies has shown that the apparent diffusion coefficient of a macromolecular solute through a cytoplasmic-like medium exhibits a power-law dependence with the excluded volume. Power laws are ubiquitous findings in diverse systems, such as metabolic processes, population dynamics, and communication networks, and have been the object of many interpretative formal approaches. This study introduces a diagrammatic algorithm, inspired in previous ones employed to analyze multicyclic chemical systems, to derive expressions for nonhomogeneous diffusion coefficients and to study the effects of volume exclusion. A most noteworthy result of this work is that midsize diagrams of nonhomogeneous diffusion are already able to exhibit an approximate power-law dependence of the diffusion coefficient with the excluded volume. The employment of the diagrammatic method for the analysis of simple situations may thus prove useful to interpret some properties of larger network systems. Hindawi Publishing Corporation 2014 2014-12-31 /pmc/articles/PMC4408758/ /pubmed/25950014 http://dx.doi.org/10.1155/2014/150826 Text en Copyright © 2014 Julio A. Hernández. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Hernández, Julio A. Diagrammatic Analysis of Nonhomogeneous Diffusion |
title | Diagrammatic Analysis of Nonhomogeneous Diffusion |
title_full | Diagrammatic Analysis of Nonhomogeneous Diffusion |
title_fullStr | Diagrammatic Analysis of Nonhomogeneous Diffusion |
title_full_unstemmed | Diagrammatic Analysis of Nonhomogeneous Diffusion |
title_short | Diagrammatic Analysis of Nonhomogeneous Diffusion |
title_sort | diagrammatic analysis of nonhomogeneous diffusion |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4408758/ https://www.ncbi.nlm.nih.gov/pubmed/25950014 http://dx.doi.org/10.1155/2014/150826 |
work_keys_str_mv | AT hernandezjulioa diagrammaticanalysisofnonhomogeneousdiffusion |