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Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland
The submarine ikaite columns located in the Ikka Fjord in Southern Greenland represent a unique, permanently cold (less than 6°C) and alkaline (above pH 10) environment and are home to a microbial community adapted to these extreme conditions. The bacterial and archaeal community inhabiting the ikai...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411134/ https://www.ncbi.nlm.nih.gov/pubmed/25915866 http://dx.doi.org/10.1371/journal.pone.0124863 |
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author | Glaring, Mikkel A. Vester, Jan K. Lylloff, Jeanette E. Abu Al-Soud, Waleed Sørensen, Søren J. Stougaard, Peter |
author_facet | Glaring, Mikkel A. Vester, Jan K. Lylloff, Jeanette E. Abu Al-Soud, Waleed Sørensen, Søren J. Stougaard, Peter |
author_sort | Glaring, Mikkel A. |
collection | PubMed |
description | The submarine ikaite columns located in the Ikka Fjord in Southern Greenland represent a unique, permanently cold (less than 6°C) and alkaline (above pH 10) environment and are home to a microbial community adapted to these extreme conditions. The bacterial and archaeal community inhabiting the ikaite columns and surrounding fjord was characterised by high-throughput pyrosequencing of 16S rRNA genes. Analysis of the ikaite community structure revealed the presence of a diverse bacterial community, both in the column interior and at the surface, and very few archaea. A clear difference in overall taxonomic composition was observed between column interior and surface. Whereas the surface, and in particular newly formed ikaite material, was primarily dominated by Cyanobacteria and phototrophic Proteobacteria, the column interior was dominated by Proteobacteria and putative anaerobic representatives of the Firmicutes and Bacteroidetes. The results suggest a stratification of the ikaite columns similar to that of classical soda lakes, with a light-exposed surface inhabited by primary producers and an anoxic subsurface. This was further supported by identification of major taxonomic groups with close relatives in soda lake environments, including members of the genera Rhodobaca, Dethiobacter, Thioalkalivibrio and Tindallia, as well as very abundant groups related to uncharacterised environmental sequences originally isolated from Mono Lake in California. |
format | Online Article Text |
id | pubmed-4411134 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44111342015-05-07 Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland Glaring, Mikkel A. Vester, Jan K. Lylloff, Jeanette E. Abu Al-Soud, Waleed Sørensen, Søren J. Stougaard, Peter PLoS One Research Article The submarine ikaite columns located in the Ikka Fjord in Southern Greenland represent a unique, permanently cold (less than 6°C) and alkaline (above pH 10) environment and are home to a microbial community adapted to these extreme conditions. The bacterial and archaeal community inhabiting the ikaite columns and surrounding fjord was characterised by high-throughput pyrosequencing of 16S rRNA genes. Analysis of the ikaite community structure revealed the presence of a diverse bacterial community, both in the column interior and at the surface, and very few archaea. A clear difference in overall taxonomic composition was observed between column interior and surface. Whereas the surface, and in particular newly formed ikaite material, was primarily dominated by Cyanobacteria and phototrophic Proteobacteria, the column interior was dominated by Proteobacteria and putative anaerobic representatives of the Firmicutes and Bacteroidetes. The results suggest a stratification of the ikaite columns similar to that of classical soda lakes, with a light-exposed surface inhabited by primary producers and an anoxic subsurface. This was further supported by identification of major taxonomic groups with close relatives in soda lake environments, including members of the genera Rhodobaca, Dethiobacter, Thioalkalivibrio and Tindallia, as well as very abundant groups related to uncharacterised environmental sequences originally isolated from Mono Lake in California. Public Library of Science 2015-04-27 /pmc/articles/PMC4411134/ /pubmed/25915866 http://dx.doi.org/10.1371/journal.pone.0124863 Text en © 2015 Glaring et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Glaring, Mikkel A. Vester, Jan K. Lylloff, Jeanette E. Abu Al-Soud, Waleed Sørensen, Søren J. Stougaard, Peter Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland |
title | Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland |
title_full | Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland |
title_fullStr | Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland |
title_full_unstemmed | Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland |
title_short | Microbial Diversity in a Permanently Cold and Alkaline Environment in Greenland |
title_sort | microbial diversity in a permanently cold and alkaline environment in greenland |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411134/ https://www.ncbi.nlm.nih.gov/pubmed/25915866 http://dx.doi.org/10.1371/journal.pone.0124863 |
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