Cargando…

High-resolution genetic mapping of maize pan-genome sequence anchors

In addition to single-nucleotide polymorphisms, structural variation is abundant in many plant genomes. The structural variation across a species can be represented by a ‘pan-genome’, which is essential to fully understand the genetic control of phenotypes. However, the pan-genome’s complexity hinde...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lu, Fei, Romay, Maria C., Glaubitz, Jeffrey C., Bradbury, Peter J., Elshire, Robert J., Wang, Tianyu, Li, Yu, Li, Yongxiang, Semagn, Kassa, Zhang, Xuecai, Hernandez, Alvaro G., Mikel, Mark A., Soifer, Ilya, Barad, Omer, Buckler, Edward S.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2015
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411285/ https://www.ncbi.nlm.nih.gov/pubmed/25881062 http://dx.doi.org/10.1038/ncomms7914

Ejemplares similares

Comprehensive genotyping of the USA national maize inbred seed bank
por: Romay, Maria C, et al.
Publicado: (2013)

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline
por: Glaubitz, Jeffrey C., et al.
Publicado: (2014)

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
por: Elshire, Robert J., et al.
Publicado: (2011)

Molecular characterization of CIMMYT maize inbred lines with genotyping-by-sequencing SNPs
por: Wu, Yongsheng, et al.
Publicado: (2016)

Construction of high-quality recombination maps with low-coverage genomic sequencing for joint linkage analysis in maize
por: Li, Chunhui, et al.
Publicado: (2015)

A conserved genetic architecture among populations of the maize progenitor, teosinte, was radically altered by domestication
por: Chen, Qiuyue, et al.
Publicado: (2021)

The genetic architecture of teosinte catalyzed and constrained maize domestication
por: Yang, Chin Jian, et al.
Publicado: (2019)

The Genetic Architecture Of Maize Height
por: Peiffer, Jason A., et al.
Publicado: (2014)

Switchgrass Genomic Diversity, Ploidy, and Evolution: Novel Insights from a Network-Based SNP Discovery Protocol
por: Lu, Fei, et al.
Publicado: (2013)

Identification of miRNA-eQTLs in maize mature leaf by GWAS
por: Chen, Shu-Yun, et al.
Publicado: (2020)

The genetic architecture of the maize progenitor, teosinte, and how it was altered during maize domestication
por: Chen, Qiuyue, et al.
Publicado: (2020)

Genomic Prediction in Maize Breeding Populations with Genotyping-by-Sequencing
por: Crossa, José, et al.
Publicado: (2013)

Genetic Control of the Leaf Angle and Leaf Orientation Value as Revealed by Ultra-High Density Maps in Three Connected Maize Populations
por: Li, Chunhui, et al.
Publicado: (2015)

Joint‐linkage mapping and GWAS reveal extensive genetic loci that regulate male inflorescence size in maize
por: Wu, Xun, et al.
Publicado: (2016)

Domestication reshaped the genetic basis of inbreeding depression in a maize landrace compared to its wild relative, teosinte
por: Samayoa, Luis Fernando, et al.
Publicado: (2021)

Numerous genetic loci identified for drought tolerance in the maize nested association mapping populations
por: Li, Chunhui, et al.
Publicado: (2016)

Genome-wide association study of Fusarium ear rot disease in the U.S.A. maize inbred line collection
por: Zila, Charles T, et al.
Publicado: (2014)

Elucidating the patterns of pleiotropy and its biological relevance in maize
por: Khaipho-Burch, Merritt, et al.
Publicado: (2023)

Genome-wide association and genomic prediction of resistance to maize lethal necrosis disease in tropical maize germplasm
por: Gowda, Manje, et al.
Publicado: (2015)

Effect of Trait Heritability, Training Population Size and Marker Density on Genomic Prediction Accuracy Estimation in 22 bi-parental Tropical Maize Populations
por: Zhang, Ao, et al.
Publicado: (2017)

Conserved noncoding sequences provide insights into regulatory sequence and loss of gene expression in maize
por: Song, Baoxing, et al.
Publicado: (2021)

Increased experimental conditions and marker densities identified more genetic loci associated with southern and northern leaf blight resistance in maize
por: Li, Yong-xiang, et al.
Publicado: (2018)

Rapid Cycling Genomic Selection in a Multiparental Tropical Maize Population
por: Zhang, Xuecai, et al.
Publicado: (2017)

Comparison of Kompetitive Allele Specific PCR (KASP) and genotyping by sequencing (GBS) for quality control analysis in maize
por: Ertiro, Berhanu Tadesse, et al.
Publicado: (2015)

Association Mapping across Numerous Traits Reveals Patterns of Functional Variation in Maize
por: Wallace, Jason G., et al.
Publicado: (2014)

Pan‐genome and multi‐parental framework for high‐resolution trait dissection in melon (Cucumis melo)
por: Oren, Elad, et al.
Publicado: (2022)

Genome-wide imputation using the practical haplotype graph in the heterozygous crop cassava
por: Long, Evan M, et al.
Publicado: (2021)

Panzea: a database and resource for molecular and functional diversity in the maize genome
por: Zhao, Wei, et al.
Publicado: (2006)

Molecular characterization of diverse CIMMYT maize inbred lines from eastern and southern Africa using single nucleotide polymorphic markers
por: Semagn, Kassa, et al.
Publicado: (2012)

Molecular diversity and selective sweeps in maize inbred lines adapted to African highlands
por: Wegary, Dagne, et al.
Publicado: (2019)

A pan-Zea genome map for enhancing maize improvement
por: Gui, Songtao, et al.
Publicado: (2022)

Meta-analyses of QTL for grain yield and anthesis silking interval in 18 maize populations evaluated under water-stressed and well-watered environments
por: Semagn, Kassa, et al.
Publicado: (2013)

Dominance Effects and Functional Enrichments Improve Prediction of Agronomic Traits in Hybrid Maize
por: Ramstein, Guillaume P., et al.
Publicado: (2020)

Discovery and validation of genomic regions associated with resistance to maize lethal necrosis in four biparental populations
por: Gowda, Manje, et al.
Publicado: (2018)

Genetic variation and population structure of maize inbred lines adapted to the mid-altitude sub-humid maize agro-ecology of Ethiopia using single nucleotide polymorphic (SNP) markers
por: Ertiro, Berhanu Tadesse, et al.
Publicado: (2017)

Genomic prediction across years in a maize doubled haploid breeding program to accelerate early-stage testcross testing
por: Wang, Nan, et al.
Publicado: (2020)

The Practical Haplotype Graph, a platform for storing and using pangenomes for imputation
por: Bradbury, P J, et al.
Publicado: (2022)

Cross-species predictive modeling reveals conserved drought responses between maize and sorghum
por: Pardo, Jeremy, et al.
Publicado: (2023)

Development of a Maize Molecular Evolutionary Genomic Database
por: Du, Chunguang, et al.
Publicado: (2003)

Performance and grain yield stability of maize populations developed using marker-assisted recurrent selection and pedigree selection procedures
por: Beyene, Yoseph, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_8nfpsa86344s1lc9ase7mdqfnl