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Effects of Three Commonly-used Diuretics on the Urinary Proteome
Biomarker is the measurable change associated with a physiological or pathophysiological process. Unlike blood which has mechanisms to keep the internal environment homeostatic, urine is more likely to reflect changes of the body. As a result, urine is likely to be a better biomarker source than blo...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411397/ https://www.ncbi.nlm.nih.gov/pubmed/24508280 http://dx.doi.org/10.1016/j.gpb.2013.12.002 |
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author | Li, Xundou Zhao, Mindi Li, Menglin Jia, Lulu Gao, Youhe |
author_facet | Li, Xundou Zhao, Mindi Li, Menglin Jia, Lulu Gao, Youhe |
author_sort | Li, Xundou |
collection | PubMed |
description | Biomarker is the measurable change associated with a physiological or pathophysiological process. Unlike blood which has mechanisms to keep the internal environment homeostatic, urine is more likely to reflect changes of the body. As a result, urine is likely to be a better biomarker source than blood. However, since the urinary proteome is affected by many factors, including diuretics, careful evaluation of those effects is necessary if urinary proteomics is used for biomarker discovery. Here, we evaluated the effects of three commonly-used diuretics (furosemide, F; hydrochlorothiazide, H; and spirolactone, S) on the urinary proteome in rats. Urine samples were collected before and after intragastric administration of diuretics at therapeutic doses and the proteomes were analyzed using label-free liquid chromatography–tandem mass spectrometry (LC–MS/MS). Based on the criteria of P ⩽ 0.05, a fold change ⩾2, a spectral count ⩾5, and false positive rate (FDR) ⩽1%, 14 proteins (seven for F, five for H, and two for S) were identified by Progenesis LC–MS. The human orthologs of most of these 14 proteins are stable in the healthy human urinary proteome, and ten of them are reported as disease biomarkers. Thus, our results suggest that the effects of diuretics deserve more attention in future urinary protein biomarker studies. Moreover, the distinct effects of diuretics on the urinary proteome may provide clues to the mechanisms of diuretics. |
format | Online Article Text |
id | pubmed-4411397 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-44113972015-05-06 Effects of Three Commonly-used Diuretics on the Urinary Proteome Li, Xundou Zhao, Mindi Li, Menglin Jia, Lulu Gao, Youhe Genomics Proteomics Bioinformatics Original Research Biomarker is the measurable change associated with a physiological or pathophysiological process. Unlike blood which has mechanisms to keep the internal environment homeostatic, urine is more likely to reflect changes of the body. As a result, urine is likely to be a better biomarker source than blood. However, since the urinary proteome is affected by many factors, including diuretics, careful evaluation of those effects is necessary if urinary proteomics is used for biomarker discovery. Here, we evaluated the effects of three commonly-used diuretics (furosemide, F; hydrochlorothiazide, H; and spirolactone, S) on the urinary proteome in rats. Urine samples were collected before and after intragastric administration of diuretics at therapeutic doses and the proteomes were analyzed using label-free liquid chromatography–tandem mass spectrometry (LC–MS/MS). Based on the criteria of P ⩽ 0.05, a fold change ⩾2, a spectral count ⩾5, and false positive rate (FDR) ⩽1%, 14 proteins (seven for F, five for H, and two for S) were identified by Progenesis LC–MS. The human orthologs of most of these 14 proteins are stable in the healthy human urinary proteome, and ten of them are reported as disease biomarkers. Thus, our results suggest that the effects of diuretics deserve more attention in future urinary protein biomarker studies. Moreover, the distinct effects of diuretics on the urinary proteome may provide clues to the mechanisms of diuretics. Elsevier 2014-06 2014-02-04 /pmc/articles/PMC4411397/ /pubmed/24508280 http://dx.doi.org/10.1016/j.gpb.2013.12.002 Text en © 2014 Beijing Institute of Genomics, Chinese Academy of Sciences and Genetics Society of China. Production and hosting by Elsevier B.V. All rights reserved. http://creativecommons.org/licenses/by-nc-sa/3.0/ This is an open access article under the CC BY-NC-SA license (http://creativecommons.org/licenses/by-nc-sa/3.0/). |
spellingShingle | Original Research Li, Xundou Zhao, Mindi Li, Menglin Jia, Lulu Gao, Youhe Effects of Three Commonly-used Diuretics on the Urinary Proteome |
title | Effects of Three Commonly-used Diuretics on the Urinary Proteome |
title_full | Effects of Three Commonly-used Diuretics on the Urinary Proteome |
title_fullStr | Effects of Three Commonly-used Diuretics on the Urinary Proteome |
title_full_unstemmed | Effects of Three Commonly-used Diuretics on the Urinary Proteome |
title_short | Effects of Three Commonly-used Diuretics on the Urinary Proteome |
title_sort | effects of three commonly-used diuretics on the urinary proteome |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411397/ https://www.ncbi.nlm.nih.gov/pubmed/24508280 http://dx.doi.org/10.1016/j.gpb.2013.12.002 |
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