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Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis
Gastric cancer (GC) is one of the most frequent malignant tumors. In order to systematically characterize the cellular and molecular mechanisms of intestinal GC development, in this study, we used 22 K oligonucleotide microarrays and bioinformatics analysis to evaluate the gene expression profiles o...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411479/ https://www.ncbi.nlm.nih.gov/pubmed/25500430 http://dx.doi.org/10.1016/j.gpb.2014.09.004 |
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author | Zang, Shizhu Guo, Ruifang Xing, Rui Zhang, Liang Li, Wenmei Zhao, Min Fang, Jingyuan Hu, Fulian Kang, Bin Ren, Yonghong Zhuang, Yonglong Liu, Siqi Wang, Rong Li, Xianghong Yu, Yingyan Cheng, Jing Lu, Youyong |
author_facet | Zang, Shizhu Guo, Ruifang Xing, Rui Zhang, Liang Li, Wenmei Zhao, Min Fang, Jingyuan Hu, Fulian Kang, Bin Ren, Yonghong Zhuang, Yonglong Liu, Siqi Wang, Rong Li, Xianghong Yu, Yingyan Cheng, Jing Lu, Youyong |
author_sort | Zang, Shizhu |
collection | PubMed |
description | Gastric cancer (GC) is one of the most frequent malignant tumors. In order to systematically characterize the cellular and molecular mechanisms of intestinal GC development, in this study, we used 22 K oligonucleotide microarrays and bioinformatics analysis to evaluate the gene expression profiles of GC in 45 tissue samples, including 20 intestinal GC tissue samples, 20 normal appearing tissues (NATs) adjacent to tumors and 5 noncancerous gastric mucosa tissue samples. These profiles allowed us to explore the transcriptional characteristics of GC and determine the change patterns in gene expression that may be of clinical significance. 1519 and 1255 differentially-expressed genes (DEGs) were identified in intestinal GC tissues and NATs, respectively, as determined by Bayesian analysis (P < 0.001). These genes were associated with diverse functions such as mucosa secretion, metabolism, proliferation, signaling and development, which occur at different stages of GC development. |
format | Online Article Text |
id | pubmed-4411479 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-44114792015-05-06 Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis Zang, Shizhu Guo, Ruifang Xing, Rui Zhang, Liang Li, Wenmei Zhao, Min Fang, Jingyuan Hu, Fulian Kang, Bin Ren, Yonghong Zhuang, Yonglong Liu, Siqi Wang, Rong Li, Xianghong Yu, Yingyan Cheng, Jing Lu, Youyong Genomics Proteomics Bioinformatics Original Research Gastric cancer (GC) is one of the most frequent malignant tumors. In order to systematically characterize the cellular and molecular mechanisms of intestinal GC development, in this study, we used 22 K oligonucleotide microarrays and bioinformatics analysis to evaluate the gene expression profiles of GC in 45 tissue samples, including 20 intestinal GC tissue samples, 20 normal appearing tissues (NATs) adjacent to tumors and 5 noncancerous gastric mucosa tissue samples. These profiles allowed us to explore the transcriptional characteristics of GC and determine the change patterns in gene expression that may be of clinical significance. 1519 and 1255 differentially-expressed genes (DEGs) were identified in intestinal GC tissues and NATs, respectively, as determined by Bayesian analysis (P < 0.001). These genes were associated with diverse functions such as mucosa secretion, metabolism, proliferation, signaling and development, which occur at different stages of GC development. Elsevier 2014-12 2014-12-11 /pmc/articles/PMC4411479/ /pubmed/25500430 http://dx.doi.org/10.1016/j.gpb.2014.09.004 Text en © 2014 The Authors. Production and hosting by Elsevier B.V. on behalf of Beijing Institute of Genomics, Chinese Academy of Sciences and Genetics Society of China. http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/3.0/). |
spellingShingle | Original Research Zang, Shizhu Guo, Ruifang Xing, Rui Zhang, Liang Li, Wenmei Zhao, Min Fang, Jingyuan Hu, Fulian Kang, Bin Ren, Yonghong Zhuang, Yonglong Liu, Siqi Wang, Rong Li, Xianghong Yu, Yingyan Cheng, Jing Lu, Youyong Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis |
title | Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis |
title_full | Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis |
title_fullStr | Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis |
title_full_unstemmed | Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis |
title_short | Identification of Differentially-expressed Genes in Intestinal Gastric Cancer by Microarray Analysis |
title_sort | identification of differentially-expressed genes in intestinal gastric cancer by microarray analysis |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411479/ https://www.ncbi.nlm.nih.gov/pubmed/25500430 http://dx.doi.org/10.1016/j.gpb.2014.09.004 |
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