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Web Resources for Model Organism Studies

An ever-growing number of resources on model organisms have emerged with the continued development of sequencing technologies. In this paper, we review 13 databases of model organisms, most of which are reported by the National Institutes of Health of the United States (NIH; http://www.nih.gov/scien...

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Detalles Bibliográficos
Autores principales: Tang, Bixia, Wang, Yanqing, Zhu, Junwei, Zhao, Wenming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411489/
https://www.ncbi.nlm.nih.gov/pubmed/25707592
http://dx.doi.org/10.1016/j.gpb.2015.01.003
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author Tang, Bixia
Wang, Yanqing
Zhu, Junwei
Zhao, Wenming
author_facet Tang, Bixia
Wang, Yanqing
Zhu, Junwei
Zhao, Wenming
author_sort Tang, Bixia
collection PubMed
description An ever-growing number of resources on model organisms have emerged with the continued development of sequencing technologies. In this paper, we review 13 databases of model organisms, most of which are reported by the National Institutes of Health of the United States (NIH; http://www.nih.gov/science/models/). We provide a brief description for each database, as well as detail its data source and types, functions, tools, and availability of access. In addition, we also provide a quality assessment about these databases. Significantly, the organism databases instituted in the early 1990s—such as the Mouse Genome Database (MGD), Saccharomyces Genome Database (SGD), and FlyBase—have developed into what are now comprehensive, core authority resources. Furthermore, all of the databases mentioned here update continually according to user feedback and with advancing technologies.
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spelling pubmed-44114892015-05-06 Web Resources for Model Organism Studies Tang, Bixia Wang, Yanqing Zhu, Junwei Zhao, Wenming Genomics Proteomics Bioinformatics Resource Review An ever-growing number of resources on model organisms have emerged with the continued development of sequencing technologies. In this paper, we review 13 databases of model organisms, most of which are reported by the National Institutes of Health of the United States (NIH; http://www.nih.gov/science/models/). We provide a brief description for each database, as well as detail its data source and types, functions, tools, and availability of access. In addition, we also provide a quality assessment about these databases. Significantly, the organism databases instituted in the early 1990s—such as the Mouse Genome Database (MGD), Saccharomyces Genome Database (SGD), and FlyBase—have developed into what are now comprehensive, core authority resources. Furthermore, all of the databases mentioned here update continually according to user feedback and with advancing technologies. Elsevier 2015-02 2015-02-20 /pmc/articles/PMC4411489/ /pubmed/25707592 http://dx.doi.org/10.1016/j.gpb.2015.01.003 Text en © 2015 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Resource Review
Tang, Bixia
Wang, Yanqing
Zhu, Junwei
Zhao, Wenming
Web Resources for Model Organism Studies
title Web Resources for Model Organism Studies
title_full Web Resources for Model Organism Studies
title_fullStr Web Resources for Model Organism Studies
title_full_unstemmed Web Resources for Model Organism Studies
title_short Web Resources for Model Organism Studies
title_sort web resources for model organism studies
topic Resource Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411489/
https://www.ncbi.nlm.nih.gov/pubmed/25707592
http://dx.doi.org/10.1016/j.gpb.2015.01.003
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