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Web Resources for Model Organism Studies
An ever-growing number of resources on model organisms have emerged with the continued development of sequencing technologies. In this paper, we review 13 databases of model organisms, most of which are reported by the National Institutes of Health of the United States (NIH; http://www.nih.gov/scien...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411489/ https://www.ncbi.nlm.nih.gov/pubmed/25707592 http://dx.doi.org/10.1016/j.gpb.2015.01.003 |
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author | Tang, Bixia Wang, Yanqing Zhu, Junwei Zhao, Wenming |
author_facet | Tang, Bixia Wang, Yanqing Zhu, Junwei Zhao, Wenming |
author_sort | Tang, Bixia |
collection | PubMed |
description | An ever-growing number of resources on model organisms have emerged with the continued development of sequencing technologies. In this paper, we review 13 databases of model organisms, most of which are reported by the National Institutes of Health of the United States (NIH; http://www.nih.gov/science/models/). We provide a brief description for each database, as well as detail its data source and types, functions, tools, and availability of access. In addition, we also provide a quality assessment about these databases. Significantly, the organism databases instituted in the early 1990s—such as the Mouse Genome Database (MGD), Saccharomyces Genome Database (SGD), and FlyBase—have developed into what are now comprehensive, core authority resources. Furthermore, all of the databases mentioned here update continually according to user feedback and with advancing technologies. |
format | Online Article Text |
id | pubmed-4411489 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-44114892015-05-06 Web Resources for Model Organism Studies Tang, Bixia Wang, Yanqing Zhu, Junwei Zhao, Wenming Genomics Proteomics Bioinformatics Resource Review An ever-growing number of resources on model organisms have emerged with the continued development of sequencing technologies. In this paper, we review 13 databases of model organisms, most of which are reported by the National Institutes of Health of the United States (NIH; http://www.nih.gov/science/models/). We provide a brief description for each database, as well as detail its data source and types, functions, tools, and availability of access. In addition, we also provide a quality assessment about these databases. Significantly, the organism databases instituted in the early 1990s—such as the Mouse Genome Database (MGD), Saccharomyces Genome Database (SGD), and FlyBase—have developed into what are now comprehensive, core authority resources. Furthermore, all of the databases mentioned here update continually according to user feedback and with advancing technologies. Elsevier 2015-02 2015-02-20 /pmc/articles/PMC4411489/ /pubmed/25707592 http://dx.doi.org/10.1016/j.gpb.2015.01.003 Text en © 2015 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Resource Review Tang, Bixia Wang, Yanqing Zhu, Junwei Zhao, Wenming Web Resources for Model Organism Studies |
title | Web Resources for Model Organism Studies |
title_full | Web Resources for Model Organism Studies |
title_fullStr | Web Resources for Model Organism Studies |
title_full_unstemmed | Web Resources for Model Organism Studies |
title_short | Web Resources for Model Organism Studies |
title_sort | web resources for model organism studies |
topic | Resource Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4411489/ https://www.ncbi.nlm.nih.gov/pubmed/25707592 http://dx.doi.org/10.1016/j.gpb.2015.01.003 |
work_keys_str_mv | AT tangbixia webresourcesformodelorganismstudies AT wangyanqing webresourcesformodelorganismstudies AT zhujunwei webresourcesformodelorganismstudies AT zhaowenming webresourcesformodelorganismstudies |