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Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms
INTRODUCTION: Arterial input function (AIF) plays an important role in the quantification of cerebral hemodynamics. The purpose of this study was to select the best reproducible clustering method for AIF detection by comparing three algorithms reported previously in terms of detection accuracy and c...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4412433/ https://www.ncbi.nlm.nih.gov/pubmed/25633539 http://dx.doi.org/10.1007/s00234-015-1493-9 |
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author | Yin, Jiandong Yang, Jiawen Guo, Qiyong |
author_facet | Yin, Jiandong Yang, Jiawen Guo, Qiyong |
author_sort | Yin, Jiandong |
collection | PubMed |
description | INTRODUCTION: Arterial input function (AIF) plays an important role in the quantification of cerebral hemodynamics. The purpose of this study was to select the best reproducible clustering method for AIF detection by comparing three algorithms reported previously in terms of detection accuracy and computational complexity. METHODS: First, three reproducible clustering methods, normalized cut (Ncut), hierarchy (HIER), and fast affine propagation (FastAP), were applied independently to simulated data which contained the true AIF. Next, a clinical verification was performed where 42 subjects participated in dynamic susceptibility contrast MRI (DSC-MRI) scanning. The manual AIF and AIFs based on the different algorithms were obtained. The performance of each algorithm was evaluated based on shape parameters of the estimated AIFs and the true or manual AIF. Moreover, the execution time of each algorithm was recorded to determine the algorithm that operated more rapidly in clinical practice. RESULTS: In terms of the detection accuracy, Ncut and HIER method produced similar AIF detection results, which were closer to the expected AIF and more accurate than those obtained using FastAP method; in terms of the computational efficiency, the Ncut method required the shortest execution time. CONCLUSION: Ncut clustering appears promising because it facilitates the automatic and robust determination of AIF with high accuracy and efficiency. |
format | Online Article Text |
id | pubmed-4412433 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-44124332015-05-11 Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms Yin, Jiandong Yang, Jiawen Guo, Qiyong Neuroradiology Functional Neuroradiology INTRODUCTION: Arterial input function (AIF) plays an important role in the quantification of cerebral hemodynamics. The purpose of this study was to select the best reproducible clustering method for AIF detection by comparing three algorithms reported previously in terms of detection accuracy and computational complexity. METHODS: First, three reproducible clustering methods, normalized cut (Ncut), hierarchy (HIER), and fast affine propagation (FastAP), were applied independently to simulated data which contained the true AIF. Next, a clinical verification was performed where 42 subjects participated in dynamic susceptibility contrast MRI (DSC-MRI) scanning. The manual AIF and AIFs based on the different algorithms were obtained. The performance of each algorithm was evaluated based on shape parameters of the estimated AIFs and the true or manual AIF. Moreover, the execution time of each algorithm was recorded to determine the algorithm that operated more rapidly in clinical practice. RESULTS: In terms of the detection accuracy, Ncut and HIER method produced similar AIF detection results, which were closer to the expected AIF and more accurate than those obtained using FastAP method; in terms of the computational efficiency, the Ncut method required the shortest execution time. CONCLUSION: Ncut clustering appears promising because it facilitates the automatic and robust determination of AIF with high accuracy and efficiency. Springer Berlin Heidelberg 2015-01-30 2015 /pmc/articles/PMC4412433/ /pubmed/25633539 http://dx.doi.org/10.1007/s00234-015-1493-9 Text en © The Author(s) 2015 https://creativecommons.org/licenses/by/4.0/ Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Functional Neuroradiology Yin, Jiandong Yang, Jiawen Guo, Qiyong Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms |
title | Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms |
title_full | Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms |
title_fullStr | Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms |
title_full_unstemmed | Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms |
title_short | Automatic determination of the arterial input function in dynamic susceptibility contrast MRI: comparison of different reproducible clustering algorithms |
title_sort | automatic determination of the arterial input function in dynamic susceptibility contrast mri: comparison of different reproducible clustering algorithms |
topic | Functional Neuroradiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4412433/ https://www.ncbi.nlm.nih.gov/pubmed/25633539 http://dx.doi.org/10.1007/s00234-015-1493-9 |
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