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Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans
Somatic hypermethylation of the O(6)-methylguanine-DNA methyltransferase gene (MGMT) was previously associated with G > A transition mutations in KRAS and TP53 in colorectal cancer (CRC). We tested the association of MGMT methylation with G > A mutations in KRAS and TP53 in 261 CRCs. Sixteen c...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4413663/ https://www.ncbi.nlm.nih.gov/pubmed/25638164 |
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author | Alonso, Sergio Dai, Yuichi Yamashita, Kentaro Horiuchi, Shina Dai, Tomoko Matsunaga, Akihiro Sánchez-Muñoz, Rosa Bilbao-Sieyro, Cristina Díaz-Chico, Juan Carlos Chernov, Andrei V. Strongin, Alex Y. Perucho, Manuel |
author_facet | Alonso, Sergio Dai, Yuichi Yamashita, Kentaro Horiuchi, Shina Dai, Tomoko Matsunaga, Akihiro Sánchez-Muñoz, Rosa Bilbao-Sieyro, Cristina Díaz-Chico, Juan Carlos Chernov, Andrei V. Strongin, Alex Y. Perucho, Manuel |
author_sort | Alonso, Sergio |
collection | PubMed |
description | Somatic hypermethylation of the O(6)-methylguanine-DNA methyltransferase gene (MGMT) was previously associated with G > A transition mutations in KRAS and TP53 in colorectal cancer (CRC). We tested the association of MGMT methylation with G > A mutations in KRAS and TP53 in 261 CRCs. Sixteen cases, with and without MGMT hypermethylation, were further analyzed by exome sequencing. No significant association of MGMT methylation with G > A mutations in KRAS, TP53 or in the whole exome was found (p > 0.5 in all comparisons). The result was validated by in silico comparison with 302 CRCs from The Cancer Genome Atlas (TCGA) consortium dataset. Transcriptional silencing associated with hypermethylation and stratified into monoallelic and biallelic. We also found a significant clustering (p = 0.001) of aberrant hypermethylation of MGMT and the matrix metalloproteinase gene ADAMTS14 in normal colonic mucosa of CRC patients. This suggested the existence of an epigenetic field defect for cancerization disrupting the methylation patterns of several loci, including MGMT or ADAMTS14, that may lead to predictive biomarkers for CRC. Methylation of these loci in normal mucosa was more frequent in elder (p = 0.001) patients, and particularly in African Americans (p = 1 × 10(−5)), thus providing a possible mechanistic link between somatic epigenetic alterations and CRC racial disparities in North America. |
format | Online Article Text |
id | pubmed-4413663 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-44136632015-05-08 Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans Alonso, Sergio Dai, Yuichi Yamashita, Kentaro Horiuchi, Shina Dai, Tomoko Matsunaga, Akihiro Sánchez-Muñoz, Rosa Bilbao-Sieyro, Cristina Díaz-Chico, Juan Carlos Chernov, Andrei V. Strongin, Alex Y. Perucho, Manuel Oncotarget Clinical Research Paper Somatic hypermethylation of the O(6)-methylguanine-DNA methyltransferase gene (MGMT) was previously associated with G > A transition mutations in KRAS and TP53 in colorectal cancer (CRC). We tested the association of MGMT methylation with G > A mutations in KRAS and TP53 in 261 CRCs. Sixteen cases, with and without MGMT hypermethylation, were further analyzed by exome sequencing. No significant association of MGMT methylation with G > A mutations in KRAS, TP53 or in the whole exome was found (p > 0.5 in all comparisons). The result was validated by in silico comparison with 302 CRCs from The Cancer Genome Atlas (TCGA) consortium dataset. Transcriptional silencing associated with hypermethylation and stratified into monoallelic and biallelic. We also found a significant clustering (p = 0.001) of aberrant hypermethylation of MGMT and the matrix metalloproteinase gene ADAMTS14 in normal colonic mucosa of CRC patients. This suggested the existence of an epigenetic field defect for cancerization disrupting the methylation patterns of several loci, including MGMT or ADAMTS14, that may lead to predictive biomarkers for CRC. Methylation of these loci in normal mucosa was more frequent in elder (p = 0.001) patients, and particularly in African Americans (p = 1 × 10(−5)), thus providing a possible mechanistic link between somatic epigenetic alterations and CRC racial disparities in North America. Impact Journals LLC 2015-02-03 /pmc/articles/PMC4413663/ /pubmed/25638164 Text en Copyright: © 2015 Alonso et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Clinical Research Paper Alonso, Sergio Dai, Yuichi Yamashita, Kentaro Horiuchi, Shina Dai, Tomoko Matsunaga, Akihiro Sánchez-Muñoz, Rosa Bilbao-Sieyro, Cristina Díaz-Chico, Juan Carlos Chernov, Andrei V. Strongin, Alex Y. Perucho, Manuel Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans |
title | Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans |
title_full | Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans |
title_fullStr | Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans |
title_full_unstemmed | Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans |
title_short | Methylation of MGMT and ADAMTS14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder African-Americans |
title_sort | methylation of mgmt and adamts14 in normal colon mucosa: biomarkers of a field defect for cancerization preferentially targeting elder african-americans |
topic | Clinical Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4413663/ https://www.ncbi.nlm.nih.gov/pubmed/25638164 |
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