Cargando…

Whole Genome Sequencing of Elite Rice Cultivars as a Comprehensive Information Resource for Marker Assisted Selection

Current advances in sequencing technologies and bioinformatics revealed the genomic background of rice, a staple food for the poor people, and provided the basis to develop large genomic variation databases for thousands of cultivars. Proper analysis of this massive resource is expected to give nove...

Descripción completa

Detalles Bibliográficos
Autores principales:	Duitama, Jorge, Silva, Alexander, Sanabria, Yamid, Cruz, Daniel Felipe, Quintero, Constanza, Ballen, Carolina, Lorieux, Mathias, Scheffler, Brian, Farmer, Andrew, Torres, Edgar, Oard, James, Tohme, Joe
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4414565/ https://www.ncbi.nlm.nih.gov/pubmed/25923345 http://dx.doi.org/10.1371/journal.pone.0124617

Ejemplares similares

Loss of a Premature Stop Codon in the Rice Wall-Associated Kinase 91 (WAK91) Gene Is a Candidate for Improving Leaf Sheath Blight Disease Resistance
por: Al-Bader, Noor, et al.
Publicado: (2023)

Patterns of Sequence Divergence and Evolution of the S(1) Orthologous Regions between Asian and African Cultivated Rice Species
por: Guyot, Romain, et al.
Publicado: (2011)

An integrated framework for discovery and genotyping of genomic variants from high-throughput sequencing experiments
por: Duitama, Jorge, et al.
Publicado: (2014)

Identification of a Rice stripe necrosis virus resistance locus and yield component QTLs using Oryza sativa × O. glaberrima introgression lines
por: Gutiérrez, Andrés Gonzalo, et al.
Publicado: (2010)

Identification of Cassava MicroRNAs under Abiotic Stress
por: Ballén-Taborda, Carolina, et al.
Publicado: (2013)

Accuracy of Genomic Selection in a Rice Synthetic Population Developed for Recurrent Selection Breeding
por: Grenier, Cécile, et al.
Publicado: (2015)

Correction: Accuracy of Genomic Selection in a Rice Synthetic Population Developed for Recurrent Selection Breeding
por: Grenier, Cécile, et al.
Publicado: (2016)

Rayada specialty: the forgotten resource of elite features of rice
por: Bin Rahman, A N M Rubaiyath, et al.
Publicado: (2013)

Morphological and physiological factors contributing to early vigor in the elite rice cultivar 9,311
por: Shi, Zai, et al.
Publicado: (2020)

Combining Image Analysis, Genome Wide Association Studies and Different Field Trials to Reveal Stable Genetic Regions Related to Panicle Architecture and the Number of Spikelets per Panicle in Rice
por: Rebolledo, Maria C., et al.
Publicado: (2016)

Development of molecular marker and introgression of Bph3 into elite rice cultivars by marker-assisted selection
por: Qing, Dongjin, et al.
Publicado: (2019)

Molecular marker assisted gene stacking for biotic and abiotic stress resistance genes in an elite rice cultivar
por: Das, Gitishree, et al.
Publicado: (2015)

Detection of heading date QTLs in advanced-backcross populations of an elite indica rice cultivar, IR64
por: Nonoue, Yasunori, et al.
Publicado: (2019)

Phenotypic and genetic dissection of component traits for early vigour in rice using plant growth modelling, sugar content analyses and association mapping
por: Rebolledo, M. C., et al.
Publicado: (2015)

Marker assisted pyramiding of two brown planthopper resistance genes, Bph3 and Bph27 (t), into elite rice Cultivars
por: Liu, Yanling, et al.
Publicado: (2016)

Marker-Assisted Pyramiding of Blast-Resistance Genes in a japonica Elite Rice Cultivar through Forward and Background Selection
por: Zampieri, Elisa, et al.
Publicado: (2023)

Optimized somatic embryogenesis and plant regeneration in elite Argentinian sugarcane (Saccharum spp.) cultivars
por: Di Pauli, Valentina, et al.
Publicado: (2021)

Differential gene expression in an elite hybrid rice cultivar (Oryza sativa, L) and its parental lines based on SAGE data
por: Song, Shuhui, et al.
Publicado: (2007)

Generation of High-Value Genomic Resource in Rice: A “Subgenomic Library” of Low-Light Tolerant Rice Cultivar Swarnaprabha
por: Sahu, Sovanlal, et al.
Publicado: (2023)

Characterizing the impact of an exotic soybean line on elite cultivar development
por: Stewart-Brown, Benjamin B., et al.
Publicado: (2020)

The complete genome sequence of elite bread wheat cultivar, “Sonmez”
por: Akpinar, Bala Ani, et al.
Publicado: (2022)

Accumulating candidate genes for broad-spectrum resistance to rice blast in a drought-tolerant rice cultivar
por: Carrillo, Maria Gay C., et al.
Publicado: (2021)

Methylation in the CHH Context Allows to Predict Recombination in Rice
por: Peñuela, Mauricio, et al.
Publicado: (2022)

Translocation of a parthenogenesis gene candidate to an alternate carrier chromosome in apomictic Brachiaria humidicola
por: Worthington, Margaret, et al.
Publicado: (2019)

Assembly of genomic reads of elite indica rice cultivar onto 2101 reference bacterial genomes for identification of co-sequenced endophytic bacteria
por: Battu, Latha, et al.
Publicado: (2017)

An efficient transformation method for genome editing of elite bread wheat cultivars
por: Biswal, Akshaya K., et al.
Publicado: (2023)

Genome-wide indel markers shared by diverse Asian rice cultivars compared to Japanese rice cultivar ‘Koshihikari’
por: Yonemaru, Jun-ichi, et al.
Publicado: (2015)

Genomic introgressions from African rice (Oryza glaberrima) in Asian rice (O. sativa) lead to the identification of key QTLs for panicle architecture
por: Adam, Hélène, et al.
Publicado: (2023)

Introgression of Blast Resistance Genes (Putative Pi-b and Pi-kh) into Elite Rice Cultivar MR219 through Marker-Assisted Selection
por: Tanweer, Fatah A., et al.
Publicado: (2015)

Yield, Grain Quality, and Starch Physicochemical Properties of 2 Elite Thai Rice Cultivars Grown under Varying Production Systems and Soil Characteristics
por: Sangwongchai, Wichian, et al.
Publicado: (2021)

Discovery of Genome-Wide DNA Polymorphisms in a Landrace Cultivar of Japonica Rice by Whole-Genome Sequencing
por: Arai-Kichise, Yuko, et al.
Publicado: (2011)

Whole genome sequencing and comparative transcriptome analysis of a novel seawater adapted, salt-resistant rice cultivar – sea rice 86
por: Chen, Risheng, et al.
Publicado: (2017)

A platinum standard pan-genome resource that represents the population structure of Asian rice
por: Zhou, Yong, et al.
Publicado: (2020)

Identification of novel major and minor QTLs associated with Xanthomonas oryzae pv. oryzae (African strains) resistance in rice (Oryza sativa L.)
por: Djedatin, Gustave, et al.
Publicado: (2016)

Insights Into the Genetics of the Zhonghua 11 Resistance to Meloidogyne graminicola and Its Molecular Determinism in Rice
por: Nguyen, Hue Thi, et al.
Publicado: (2022)

Identification of an Elite Core Panel as a Key Breeding Resource to Accelerate the Rate of Genetic Improvement for Irrigated Rice
por: Juma, Roselyne U., et al.
Publicado: (2021)

Development of cytoplasmic male sterile lines and restorer lines of various elite Indica Group rice cultivars using CW-CMS/Rf17 system
por: Toriyama, Kinya, et al.
Publicado: (2019)

Improved bacterial leaf blight disease resistance in the major elite Vietnamese rice cultivar TBR225 via editing of the OsSWEET14 promoter
por: Duy, Phuong Nguyen, et al.
Publicado: (2021)

Marker Assisted Introgression of Resistance Genes and Phenotypic Evaluation Enabled Identification of Durable and Broad-Spectrum Blast Resistance in Elite Rice Cultivar, CO 51
por: Thulasinathan, Thiyagarajan, et al.
Publicado: (2023)

A set of AP2-like genes is associated with inflorescence branching and architecture in domesticated rice
por: Harrop, Thomas W R, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_717tfradpi9ehkh0d6u7lfjqqc