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Lactococcus garvieae: a small bacteria and a big data world
OBJECTIVE: To describe the importance of bioinformatics tools to analyze the big data yielded from new "omics" generation-methods, with the aim of unraveling the biology of the pathogen bacteria Lactococcus garvieae. METHODS: The paper provides the vision of the large volume of data genera...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4416232/ https://www.ncbi.nlm.nih.gov/pubmed/25960872 http://dx.doi.org/10.1186/2047-2501-3-S1-S5 |
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author | López-Campos, Guillermo Aguado-Urda, Mónica Blanco, María Mar Gibello, Alicia Cutuli, María Teresa López-Alonso, Victoria Martín-Sánchez, Fernando Fernández-Garayzábal, José F |
author_facet | López-Campos, Guillermo Aguado-Urda, Mónica Blanco, María Mar Gibello, Alicia Cutuli, María Teresa López-Alonso, Victoria Martín-Sánchez, Fernando Fernández-Garayzábal, José F |
author_sort | López-Campos, Guillermo |
collection | PubMed |
description | OBJECTIVE: To describe the importance of bioinformatics tools to analyze the big data yielded from new "omics" generation-methods, with the aim of unraveling the biology of the pathogen bacteria Lactococcus garvieae. METHODS: The paper provides the vision of the large volume of data generated from genome sequences, gene expression profiles by microarrays and other experimental methods that require biomedical informatics methods for management and analysis. RESULTS: The use of biomedical informatics methods improves the analysis of big data in order to obtain a comprehensive characterization and understanding of the biology of pathogenic organisms, such as L. garvieae. CONCLUSIONS: The "Big Data" concepts of high volume, veracity and variety are nowadays part of the research in microbiology associated with the use of multiple methods in the "omic" era. The use of biomedical informatics methods is a requisite necessary to improve the analysis of these data. |
format | Online Article Text |
id | pubmed-4416232 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-44162322015-05-08 Lactococcus garvieae: a small bacteria and a big data world López-Campos, Guillermo Aguado-Urda, Mónica Blanco, María Mar Gibello, Alicia Cutuli, María Teresa López-Alonso, Victoria Martín-Sánchez, Fernando Fernández-Garayzábal, José F Health Inf Sci Syst Research OBJECTIVE: To describe the importance of bioinformatics tools to analyze the big data yielded from new "omics" generation-methods, with the aim of unraveling the biology of the pathogen bacteria Lactococcus garvieae. METHODS: The paper provides the vision of the large volume of data generated from genome sequences, gene expression profiles by microarrays and other experimental methods that require biomedical informatics methods for management and analysis. RESULTS: The use of biomedical informatics methods improves the analysis of big data in order to obtain a comprehensive characterization and understanding of the biology of pathogenic organisms, such as L. garvieae. CONCLUSIONS: The "Big Data" concepts of high volume, veracity and variety are nowadays part of the research in microbiology associated with the use of multiple methods in the "omic" era. The use of biomedical informatics methods is a requisite necessary to improve the analysis of these data. BioMed Central 2015-02-24 /pmc/articles/PMC4416232/ /pubmed/25960872 http://dx.doi.org/10.1186/2047-2501-3-S1-S5 Text en Copyright © 2015 Campos et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research López-Campos, Guillermo Aguado-Urda, Mónica Blanco, María Mar Gibello, Alicia Cutuli, María Teresa López-Alonso, Victoria Martín-Sánchez, Fernando Fernández-Garayzábal, José F Lactococcus garvieae: a small bacteria and a big data world |
title | Lactococcus garvieae: a small bacteria and a big data world |
title_full | Lactococcus garvieae: a small bacteria and a big data world |
title_fullStr | Lactococcus garvieae: a small bacteria and a big data world |
title_full_unstemmed | Lactococcus garvieae: a small bacteria and a big data world |
title_short | Lactococcus garvieae: a small bacteria and a big data world |
title_sort | lactococcus garvieae: a small bacteria and a big data world |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4416232/ https://www.ncbi.nlm.nih.gov/pubmed/25960872 http://dx.doi.org/10.1186/2047-2501-3-S1-S5 |
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