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Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models
BACKGROUND: In recent years high resolution animal tracking data has become the standard in movement ecology. The Brownian Bridge Movement Model (BBMM) is a widely adopted approach to describe animal space use from such high resolution tracks. One of the underlying assumptions of the BBMM is isotrop...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4416317/ https://www.ncbi.nlm.nih.gov/pubmed/25937928 http://dx.doi.org/10.1186/2051-3933-2-5 |
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author | Kranstauber, Bart Safi, Kamran Bartumeus, Frederic |
author_facet | Kranstauber, Bart Safi, Kamran Bartumeus, Frederic |
author_sort | Kranstauber, Bart |
collection | PubMed |
description | BACKGROUND: In recent years high resolution animal tracking data has become the standard in movement ecology. The Brownian Bridge Movement Model (BBMM) is a widely adopted approach to describe animal space use from such high resolution tracks. One of the underlying assumptions of the BBMM is isotropic diffusive motion between consecutive locations, i.e. invariant with respect to the direction. Here we propose to relax this often unrealistic assumption by separating the Brownian motion variance into two directional components, one parallel and one orthogonal to the direction of the motion. RESULTS: Our new model, the Bivariate Gaussian bridge (BGB), tracks movement heterogeneity across time. Using the BGB and identifying directed and non-directed movement within a trajectory resulted in more accurate utilisation distributions compared to dynamic Brownian bridges, especially for trajectories with a non-isotropic diffusion, such as directed movement or Lévy like movements. We evaluated our model with simulated trajectories and observed tracks, demonstrating that the improvement of our model scales with the directional correlation of a correlated random walk. CONCLUSION: We find that many of the animal trajectories do not adhere to the assumptions of the BBMM. The proposed model improves accuracy when describing the space use both in simulated correlated random walks as well as observed animal tracks. Our novel approach is implemented and available within the “move” package for R. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/2051-3933-2-5) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4416317 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-44163172015-05-02 Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models Kranstauber, Bart Safi, Kamran Bartumeus, Frederic Mov Ecol Methodology Article BACKGROUND: In recent years high resolution animal tracking data has become the standard in movement ecology. The Brownian Bridge Movement Model (BBMM) is a widely adopted approach to describe animal space use from such high resolution tracks. One of the underlying assumptions of the BBMM is isotropic diffusive motion between consecutive locations, i.e. invariant with respect to the direction. Here we propose to relax this often unrealistic assumption by separating the Brownian motion variance into two directional components, one parallel and one orthogonal to the direction of the motion. RESULTS: Our new model, the Bivariate Gaussian bridge (BGB), tracks movement heterogeneity across time. Using the BGB and identifying directed and non-directed movement within a trajectory resulted in more accurate utilisation distributions compared to dynamic Brownian bridges, especially for trajectories with a non-isotropic diffusion, such as directed movement or Lévy like movements. We evaluated our model with simulated trajectories and observed tracks, demonstrating that the improvement of our model scales with the directional correlation of a correlated random walk. CONCLUSION: We find that many of the animal trajectories do not adhere to the assumptions of the BBMM. The proposed model improves accuracy when describing the space use both in simulated correlated random walks as well as observed animal tracks. Our novel approach is implemented and available within the “move” package for R. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/2051-3933-2-5) contains supplementary material, which is available to authorized users. BioMed Central 2014-03-01 /pmc/articles/PMC4416317/ /pubmed/25937928 http://dx.doi.org/10.1186/2051-3933-2-5 Text en © Kranstauber et al.; licensee BioMed Central Ltd. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Methodology Article Kranstauber, Bart Safi, Kamran Bartumeus, Frederic Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models |
title | Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models |
title_full | Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models |
title_fullStr | Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models |
title_full_unstemmed | Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models |
title_short | Bivariate Gaussian bridges: directional factorization of diffusion in Brownian bridge models |
title_sort | bivariate gaussian bridges: directional factorization of diffusion in brownian bridge models |
topic | Methodology Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4416317/ https://www.ncbi.nlm.nih.gov/pubmed/25937928 http://dx.doi.org/10.1186/2051-3933-2-5 |
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