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An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics
Developing population dynamics models for zebrafish is crucial in order to extrapolate from toxicity data measured at the organism level to biological levels relevant to support and enhance ecological risk assessment. To achieve this, a dynamic energy budget for individual zebrafish (DEB model) was...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4418570/ https://www.ncbi.nlm.nih.gov/pubmed/25938409 http://dx.doi.org/10.1371/journal.pone.0125841 |
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author | Beaudouin, Rémy Goussen, Benoit Piccini, Benjamin Augustine, Starrlight Devillers, James Brion, François Péry, Alexandre R. R. |
author_facet | Beaudouin, Rémy Goussen, Benoit Piccini, Benjamin Augustine, Starrlight Devillers, James Brion, François Péry, Alexandre R. R. |
author_sort | Beaudouin, Rémy |
collection | PubMed |
description | Developing population dynamics models for zebrafish is crucial in order to extrapolate from toxicity data measured at the organism level to biological levels relevant to support and enhance ecological risk assessment. To achieve this, a dynamic energy budget for individual zebrafish (DEB model) was coupled to an individual based model of zebrafish population dynamics (IBM model). Next, we fitted the DEB model to new experimental data on zebrafish growth and reproduction thus improving existing models. We further analysed the DEB-model and DEB-IBM using a sensitivity analysis. Finally, the predictions of the DEB-IBM were compared to existing observations on natural zebrafish populations and the predicted population dynamics are realistic. While our zebrafish DEB-IBM model can still be improved by acquiring new experimental data on the most uncertain processes (e.g. survival or feeding), it can already serve to predict the impact of compounds at the population level. |
format | Online Article Text |
id | pubmed-4418570 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-44185702015-05-12 An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics Beaudouin, Rémy Goussen, Benoit Piccini, Benjamin Augustine, Starrlight Devillers, James Brion, François Péry, Alexandre R. R. PLoS One Research Article Developing population dynamics models for zebrafish is crucial in order to extrapolate from toxicity data measured at the organism level to biological levels relevant to support and enhance ecological risk assessment. To achieve this, a dynamic energy budget for individual zebrafish (DEB model) was coupled to an individual based model of zebrafish population dynamics (IBM model). Next, we fitted the DEB model to new experimental data on zebrafish growth and reproduction thus improving existing models. We further analysed the DEB-model and DEB-IBM using a sensitivity analysis. Finally, the predictions of the DEB-IBM were compared to existing observations on natural zebrafish populations and the predicted population dynamics are realistic. While our zebrafish DEB-IBM model can still be improved by acquiring new experimental data on the most uncertain processes (e.g. survival or feeding), it can already serve to predict the impact of compounds at the population level. Public Library of Science 2015-05-04 /pmc/articles/PMC4418570/ /pubmed/25938409 http://dx.doi.org/10.1371/journal.pone.0125841 Text en © 2015 Beaudouin et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Beaudouin, Rémy Goussen, Benoit Piccini, Benjamin Augustine, Starrlight Devillers, James Brion, François Péry, Alexandre R. R. An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics |
title | An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics |
title_full | An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics |
title_fullStr | An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics |
title_full_unstemmed | An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics |
title_short | An Individual-Based Model of Zebrafish Population Dynamics Accounting for Energy Dynamics |
title_sort | individual-based model of zebrafish population dynamics accounting for energy dynamics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4418570/ https://www.ncbi.nlm.nih.gov/pubmed/25938409 http://dx.doi.org/10.1371/journal.pone.0125841 |
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