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Convergence and divergence of genetic and modular networks between diabetes and breast cancer

Diabetes mellitus (DM) and breast cancer (BC) can simultaneously occur in the same patient populations, but the molecular relationship between them remains unknown. In this study, we constructed genetic networks and used modularized analysis approaches to investigate the multi-dimensional characteri...

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Autores principales: Zhang, Xiaoxu, Zhang, Yingying, Yu, Yanan, Liu, Jun, Yuan, Ye, Zhao, Yijun, Li, Haixia, Wang, Jie, Wang, Zhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BlackWell Publishing Ltd 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4420611/
https://www.ncbi.nlm.nih.gov/pubmed/25752479
http://dx.doi.org/10.1111/jcmm.12504
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author Zhang, Xiaoxu
Zhang, Yingying
Yu, Yanan
Liu, Jun
Yuan, Ye
Zhao, Yijun
Li, Haixia
Wang, Jie
Wang, Zhong
author_facet Zhang, Xiaoxu
Zhang, Yingying
Yu, Yanan
Liu, Jun
Yuan, Ye
Zhao, Yijun
Li, Haixia
Wang, Jie
Wang, Zhong
author_sort Zhang, Xiaoxu
collection PubMed
description Diabetes mellitus (DM) and breast cancer (BC) can simultaneously occur in the same patient populations, but the molecular relationship between them remains unknown. In this study, we constructed genetic networks and used modularized analysis approaches to investigate the multi-dimensional characteristics of two diseases and one disease subtype. A text search engine (Agilent Literature Search 2.71) and MCODE software were applied to validate potential subnetworks and to divide the modules, respectively. A total of 793 DM-related genes, 386 type 2 diabetes (T2DM) genes and 873 BC-related genes were identified from the Online Mendelian Inheritance in Man database. For DM and BC, a total of 99 overlapping genes, 9 modules, 29 biological processes and 7 pathways were identified. Meanwhile, for T2DM and BC, 56 overlapping genes, 5 modules, 20 biological processes and 12 pathways were identified. Based on the Gene Ontology functional enrichment analysis of the top 10 non-overlapping modules of the two diseases, 10 biological functions and 5 pathways overlapped between them. The glycosphingolipid and lysosome pathways verified molecular mechanisms of cell death related to both DM and BC. We also identified new biological functions of dopamine receptors and four signalling pathways (Parkinson's disease, Alzheimer's disease, Huntington's disease and long-term depression) related to both diseases; these warrant further investigation. Our results illustrate the landscape of the novel molecular substructures between DM and BC, which may support a new model for complex disease classification and rational therapies for multiple diseases.
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spelling pubmed-44206112015-05-12 Convergence and divergence of genetic and modular networks between diabetes and breast cancer Zhang, Xiaoxu Zhang, Yingying Yu, Yanan Liu, Jun Yuan, Ye Zhao, Yijun Li, Haixia Wang, Jie Wang, Zhong J Cell Mol Med Original Articles Diabetes mellitus (DM) and breast cancer (BC) can simultaneously occur in the same patient populations, but the molecular relationship between them remains unknown. In this study, we constructed genetic networks and used modularized analysis approaches to investigate the multi-dimensional characteristics of two diseases and one disease subtype. A text search engine (Agilent Literature Search 2.71) and MCODE software were applied to validate potential subnetworks and to divide the modules, respectively. A total of 793 DM-related genes, 386 type 2 diabetes (T2DM) genes and 873 BC-related genes were identified from the Online Mendelian Inheritance in Man database. For DM and BC, a total of 99 overlapping genes, 9 modules, 29 biological processes and 7 pathways were identified. Meanwhile, for T2DM and BC, 56 overlapping genes, 5 modules, 20 biological processes and 12 pathways were identified. Based on the Gene Ontology functional enrichment analysis of the top 10 non-overlapping modules of the two diseases, 10 biological functions and 5 pathways overlapped between them. The glycosphingolipid and lysosome pathways verified molecular mechanisms of cell death related to both DM and BC. We also identified new biological functions of dopamine receptors and four signalling pathways (Parkinson's disease, Alzheimer's disease, Huntington's disease and long-term depression) related to both diseases; these warrant further investigation. Our results illustrate the landscape of the novel molecular substructures between DM and BC, which may support a new model for complex disease classification and rational therapies for multiple diseases. BlackWell Publishing Ltd 2015-05 2015-03-06 /pmc/articles/PMC4420611/ /pubmed/25752479 http://dx.doi.org/10.1111/jcmm.12504 Text en © 2015 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Zhang, Xiaoxu
Zhang, Yingying
Yu, Yanan
Liu, Jun
Yuan, Ye
Zhao, Yijun
Li, Haixia
Wang, Jie
Wang, Zhong
Convergence and divergence of genetic and modular networks between diabetes and breast cancer
title Convergence and divergence of genetic and modular networks between diabetes and breast cancer
title_full Convergence and divergence of genetic and modular networks between diabetes and breast cancer
title_fullStr Convergence and divergence of genetic and modular networks between diabetes and breast cancer
title_full_unstemmed Convergence and divergence of genetic and modular networks between diabetes and breast cancer
title_short Convergence and divergence of genetic and modular networks between diabetes and breast cancer
title_sort convergence and divergence of genetic and modular networks between diabetes and breast cancer
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4420611/
https://www.ncbi.nlm.nih.gov/pubmed/25752479
http://dx.doi.org/10.1111/jcmm.12504
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