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Convergence and divergence of genetic and modular networks between diabetes and breast cancer
Diabetes mellitus (DM) and breast cancer (BC) can simultaneously occur in the same patient populations, but the molecular relationship between them remains unknown. In this study, we constructed genetic networks and used modularized analysis approaches to investigate the multi-dimensional characteri...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BlackWell Publishing Ltd
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4420611/ https://www.ncbi.nlm.nih.gov/pubmed/25752479 http://dx.doi.org/10.1111/jcmm.12504 |
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author | Zhang, Xiaoxu Zhang, Yingying Yu, Yanan Liu, Jun Yuan, Ye Zhao, Yijun Li, Haixia Wang, Jie Wang, Zhong |
author_facet | Zhang, Xiaoxu Zhang, Yingying Yu, Yanan Liu, Jun Yuan, Ye Zhao, Yijun Li, Haixia Wang, Jie Wang, Zhong |
author_sort | Zhang, Xiaoxu |
collection | PubMed |
description | Diabetes mellitus (DM) and breast cancer (BC) can simultaneously occur in the same patient populations, but the molecular relationship between them remains unknown. In this study, we constructed genetic networks and used modularized analysis approaches to investigate the multi-dimensional characteristics of two diseases and one disease subtype. A text search engine (Agilent Literature Search 2.71) and MCODE software were applied to validate potential subnetworks and to divide the modules, respectively. A total of 793 DM-related genes, 386 type 2 diabetes (T2DM) genes and 873 BC-related genes were identified from the Online Mendelian Inheritance in Man database. For DM and BC, a total of 99 overlapping genes, 9 modules, 29 biological processes and 7 pathways were identified. Meanwhile, for T2DM and BC, 56 overlapping genes, 5 modules, 20 biological processes and 12 pathways were identified. Based on the Gene Ontology functional enrichment analysis of the top 10 non-overlapping modules of the two diseases, 10 biological functions and 5 pathways overlapped between them. The glycosphingolipid and lysosome pathways verified molecular mechanisms of cell death related to both DM and BC. We also identified new biological functions of dopamine receptors and four signalling pathways (Parkinson's disease, Alzheimer's disease, Huntington's disease and long-term depression) related to both diseases; these warrant further investigation. Our results illustrate the landscape of the novel molecular substructures between DM and BC, which may support a new model for complex disease classification and rational therapies for multiple diseases. |
format | Online Article Text |
id | pubmed-4420611 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BlackWell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-44206112015-05-12 Convergence and divergence of genetic and modular networks between diabetes and breast cancer Zhang, Xiaoxu Zhang, Yingying Yu, Yanan Liu, Jun Yuan, Ye Zhao, Yijun Li, Haixia Wang, Jie Wang, Zhong J Cell Mol Med Original Articles Diabetes mellitus (DM) and breast cancer (BC) can simultaneously occur in the same patient populations, but the molecular relationship between them remains unknown. In this study, we constructed genetic networks and used modularized analysis approaches to investigate the multi-dimensional characteristics of two diseases and one disease subtype. A text search engine (Agilent Literature Search 2.71) and MCODE software were applied to validate potential subnetworks and to divide the modules, respectively. A total of 793 DM-related genes, 386 type 2 diabetes (T2DM) genes and 873 BC-related genes were identified from the Online Mendelian Inheritance in Man database. For DM and BC, a total of 99 overlapping genes, 9 modules, 29 biological processes and 7 pathways were identified. Meanwhile, for T2DM and BC, 56 overlapping genes, 5 modules, 20 biological processes and 12 pathways were identified. Based on the Gene Ontology functional enrichment analysis of the top 10 non-overlapping modules of the two diseases, 10 biological functions and 5 pathways overlapped between them. The glycosphingolipid and lysosome pathways verified molecular mechanisms of cell death related to both DM and BC. We also identified new biological functions of dopamine receptors and four signalling pathways (Parkinson's disease, Alzheimer's disease, Huntington's disease and long-term depression) related to both diseases; these warrant further investigation. Our results illustrate the landscape of the novel molecular substructures between DM and BC, which may support a new model for complex disease classification and rational therapies for multiple diseases. BlackWell Publishing Ltd 2015-05 2015-03-06 /pmc/articles/PMC4420611/ /pubmed/25752479 http://dx.doi.org/10.1111/jcmm.12504 Text en © 2015 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Zhang, Xiaoxu Zhang, Yingying Yu, Yanan Liu, Jun Yuan, Ye Zhao, Yijun Li, Haixia Wang, Jie Wang, Zhong Convergence and divergence of genetic and modular networks between diabetes and breast cancer |
title | Convergence and divergence of genetic and modular networks between diabetes and breast cancer |
title_full | Convergence and divergence of genetic and modular networks between diabetes and breast cancer |
title_fullStr | Convergence and divergence of genetic and modular networks between diabetes and breast cancer |
title_full_unstemmed | Convergence and divergence of genetic and modular networks between diabetes and breast cancer |
title_short | Convergence and divergence of genetic and modular networks between diabetes and breast cancer |
title_sort | convergence and divergence of genetic and modular networks between diabetes and breast cancer |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4420611/ https://www.ncbi.nlm.nih.gov/pubmed/25752479 http://dx.doi.org/10.1111/jcmm.12504 |
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