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The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan
Metabolic rate and lifespan are important biological parameters that are studied in a wide range of research fields. They are known to correlate with body mass, but their association with gene (protein) functions is poorly understood. In this study, we collected data on the metabolic rate and lifesp...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421859/ https://www.ncbi.nlm.nih.gov/pubmed/25943793 http://dx.doi.org/10.1038/srep10008 |
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author | Takemoto, Kazuhiro Kawakami, Yuko |
author_facet | Takemoto, Kazuhiro Kawakami, Yuko |
author_sort | Takemoto, Kazuhiro |
collection | PubMed |
description | Metabolic rate and lifespan are important biological parameters that are studied in a wide range of research fields. They are known to correlate with body mass, but their association with gene (protein) functions is poorly understood. In this study, we collected data on the metabolic rate and lifespan of various organisms and investigated the relationship of these parameters with their genomes. We showed that the proportion of genes in a functional category, but not genome size, was correlated with mass-specific metabolic rate and maximal lifespan. In particular, the proportion of genes in oxic reactions (which occur in the presence of oxygen) was significantly associated with these two biological parameters. Additionally, we found that temperature, taxonomy, and mode-of-life traits had little effect on the observed associations. Our findings emphasize the importance of considering the biological functions of genes when investigating the relationships between genome, metabolic rate, and lifespan. Moreover, this provides further insights into these relationships, and may be useful for estimating metabolic rate and lifespan in individuals and the ecosystem using a combination of body mass measurements and genomic data. |
format | Online Article Text |
id | pubmed-4421859 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44218592015-05-18 The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan Takemoto, Kazuhiro Kawakami, Yuko Sci Rep Article Metabolic rate and lifespan are important biological parameters that are studied in a wide range of research fields. They are known to correlate with body mass, but their association with gene (protein) functions is poorly understood. In this study, we collected data on the metabolic rate and lifespan of various organisms and investigated the relationship of these parameters with their genomes. We showed that the proportion of genes in a functional category, but not genome size, was correlated with mass-specific metabolic rate and maximal lifespan. In particular, the proportion of genes in oxic reactions (which occur in the presence of oxygen) was significantly associated with these two biological parameters. Additionally, we found that temperature, taxonomy, and mode-of-life traits had little effect on the observed associations. Our findings emphasize the importance of considering the biological functions of genes when investigating the relationships between genome, metabolic rate, and lifespan. Moreover, this provides further insights into these relationships, and may be useful for estimating metabolic rate and lifespan in individuals and the ecosystem using a combination of body mass measurements and genomic data. Nature Publishing Group 2015-05-06 /pmc/articles/PMC4421859/ /pubmed/25943793 http://dx.doi.org/10.1038/srep10008 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Takemoto, Kazuhiro Kawakami, Yuko The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan |
title | The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan |
title_full | The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan |
title_fullStr | The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan |
title_full_unstemmed | The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan |
title_short | The proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan |
title_sort | proportion of genes in a functional category is linked to mass-specific metabolic rate and lifespan |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421859/ https://www.ncbi.nlm.nih.gov/pubmed/25943793 http://dx.doi.org/10.1038/srep10008 |
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