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An open science resource for establishing reliability and reproducibility in functional connectomics
Efforts to identify meaningful functional imaging-based biomarkers are limited by the ability to reliably characterize inter-individual differences in human brain function. Although a growing number of connectomics-based measures are reported to have moderate to high test-retest reliability, the var...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421932/ https://www.ncbi.nlm.nih.gov/pubmed/25977800 http://dx.doi.org/10.1038/sdata.2014.49 |
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author | Zuo, Xi-Nian Anderson, Jeffrey S Bellec, Pierre Birn, Rasmus M Biswal, Bharat B Blautzik, Janusch Breitner, John C.S Buckner, Randy L Calhoun, Vince D Castellanos, F. Xavier Chen, Antao Chen, Bing Chen, Jiangtao Chen, Xu Colcombe, Stanley J Courtney, William Craddock, R Cameron Di Martino, Adriana Dong, Hao-Ming Fu, Xiaolan Gong, Qiyong Gorgolewski, Krzysztof J Han, Ying He, Ye He, Yong Ho, Erica Holmes, Avram Hou, Xiao-Hui Huckins, Jeremy Jiang, Tianzi Jiang, Yi Kelley, William Kelly, Clare King, Margaret LaConte, Stephen M Lainhart, Janet E Lei, Xu Li, Hui-Jie Li, Kaiming Li, Kuncheng Lin, Qixiang Liu, Dongqiang Liu, Jia Liu, Xun Liu, Yijun Lu, Guangming Lu, Jie Luna, Beatriz Luo, Jing Lurie, Daniel Mao, Ying Margulies, Daniel S Mayer, Andrew R Meindl, Thomas Meyerand, Mary E Nan, Weizhi Nielsen, Jared A O’Connor, David Paulsen, David Prabhakaran, Vivek Qi, Zhigang Qiu, Jiang Shao, Chunhong Shehzad, Zarrar Tang, Weijun Villringer, Arno Wang, Huiling Wang, Kai Wei, Dongtao Wei, Gao-Xia Weng, Xu-Chu Wu, Xuehai Xu, Ting Yang, Ning Yang, Zhi Zang, Yu-Feng Zhang, Lei Zhang, Qinglin Zhang, Zhe Zhang, Zhiqiang Zhao, Ke Zhen, Zonglei Zhou, Yuan Zhu, Xing-Ting Milham, Michael P |
author_facet | Zuo, Xi-Nian Anderson, Jeffrey S Bellec, Pierre Birn, Rasmus M Biswal, Bharat B Blautzik, Janusch Breitner, John C.S Buckner, Randy L Calhoun, Vince D Castellanos, F. Xavier Chen, Antao Chen, Bing Chen, Jiangtao Chen, Xu Colcombe, Stanley J Courtney, William Craddock, R Cameron Di Martino, Adriana Dong, Hao-Ming Fu, Xiaolan Gong, Qiyong Gorgolewski, Krzysztof J Han, Ying He, Ye He, Yong Ho, Erica Holmes, Avram Hou, Xiao-Hui Huckins, Jeremy Jiang, Tianzi Jiang, Yi Kelley, William Kelly, Clare King, Margaret LaConte, Stephen M Lainhart, Janet E Lei, Xu Li, Hui-Jie Li, Kaiming Li, Kuncheng Lin, Qixiang Liu, Dongqiang Liu, Jia Liu, Xun Liu, Yijun Lu, Guangming Lu, Jie Luna, Beatriz Luo, Jing Lurie, Daniel Mao, Ying Margulies, Daniel S Mayer, Andrew R Meindl, Thomas Meyerand, Mary E Nan, Weizhi Nielsen, Jared A O’Connor, David Paulsen, David Prabhakaran, Vivek Qi, Zhigang Qiu, Jiang Shao, Chunhong Shehzad, Zarrar Tang, Weijun Villringer, Arno Wang, Huiling Wang, Kai Wei, Dongtao Wei, Gao-Xia Weng, Xu-Chu Wu, Xuehai Xu, Ting Yang, Ning Yang, Zhi Zang, Yu-Feng Zhang, Lei Zhang, Qinglin Zhang, Zhe Zhang, Zhiqiang Zhao, Ke Zhen, Zonglei Zhou, Yuan Zhu, Xing-Ting Milham, Michael P |
author_sort | Zuo, Xi-Nian |
collection | PubMed |
description | Efforts to identify meaningful functional imaging-based biomarkers are limited by the ability to reliably characterize inter-individual differences in human brain function. Although a growing number of connectomics-based measures are reported to have moderate to high test-retest reliability, the variability in data acquisition, experimental designs, and analytic methods precludes the ability to generalize results. The Consortium for Reliability and Reproducibility (CoRR) is working to address this challenge and establish test-retest reliability as a minimum standard for methods development in functional connectomics. Specifically, CoRR has aggregated 1,629 typical individuals’ resting state fMRI (rfMRI) data (5,093 rfMRI scans) from 18 international sites, and is openly sharing them via the International Data-sharing Neuroimaging Initiative (INDI). To allow researchers to generate various estimates of reliability and reproducibility, a variety of data acquisition procedures and experimental designs are included. Similarly, to enable users to assess the impact of commonly encountered artifacts (for example, motion) on characterizations of inter-individual variation, datasets of varying quality are included. |
format | Online Article Text |
id | pubmed-4421932 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-44219322015-05-14 An open science resource for establishing reliability and reproducibility in functional connectomics Zuo, Xi-Nian Anderson, Jeffrey S Bellec, Pierre Birn, Rasmus M Biswal, Bharat B Blautzik, Janusch Breitner, John C.S Buckner, Randy L Calhoun, Vince D Castellanos, F. Xavier Chen, Antao Chen, Bing Chen, Jiangtao Chen, Xu Colcombe, Stanley J Courtney, William Craddock, R Cameron Di Martino, Adriana Dong, Hao-Ming Fu, Xiaolan Gong, Qiyong Gorgolewski, Krzysztof J Han, Ying He, Ye He, Yong Ho, Erica Holmes, Avram Hou, Xiao-Hui Huckins, Jeremy Jiang, Tianzi Jiang, Yi Kelley, William Kelly, Clare King, Margaret LaConte, Stephen M Lainhart, Janet E Lei, Xu Li, Hui-Jie Li, Kaiming Li, Kuncheng Lin, Qixiang Liu, Dongqiang Liu, Jia Liu, Xun Liu, Yijun Lu, Guangming Lu, Jie Luna, Beatriz Luo, Jing Lurie, Daniel Mao, Ying Margulies, Daniel S Mayer, Andrew R Meindl, Thomas Meyerand, Mary E Nan, Weizhi Nielsen, Jared A O’Connor, David Paulsen, David Prabhakaran, Vivek Qi, Zhigang Qiu, Jiang Shao, Chunhong Shehzad, Zarrar Tang, Weijun Villringer, Arno Wang, Huiling Wang, Kai Wei, Dongtao Wei, Gao-Xia Weng, Xu-Chu Wu, Xuehai Xu, Ting Yang, Ning Yang, Zhi Zang, Yu-Feng Zhang, Lei Zhang, Qinglin Zhang, Zhe Zhang, Zhiqiang Zhao, Ke Zhen, Zonglei Zhou, Yuan Zhu, Xing-Ting Milham, Michael P Sci Data Data Descriptor Efforts to identify meaningful functional imaging-based biomarkers are limited by the ability to reliably characterize inter-individual differences in human brain function. Although a growing number of connectomics-based measures are reported to have moderate to high test-retest reliability, the variability in data acquisition, experimental designs, and analytic methods precludes the ability to generalize results. The Consortium for Reliability and Reproducibility (CoRR) is working to address this challenge and establish test-retest reliability as a minimum standard for methods development in functional connectomics. Specifically, CoRR has aggregated 1,629 typical individuals’ resting state fMRI (rfMRI) data (5,093 rfMRI scans) from 18 international sites, and is openly sharing them via the International Data-sharing Neuroimaging Initiative (INDI). To allow researchers to generate various estimates of reliability and reproducibility, a variety of data acquisition procedures and experimental designs are included. Similarly, to enable users to assess the impact of commonly encountered artifacts (for example, motion) on characterizations of inter-individual variation, datasets of varying quality are included. Nature Publishing Group 2014-12-09 /pmc/articles/PMC4421932/ /pubmed/25977800 http://dx.doi.org/10.1038/sdata.2014.49 Text en Copyright © 2014, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0 Metadata associated with this Data Descriptor is available at http://www.nature.com/sdata/ and is released under the CC0 waiver to maximize reuse. |
spellingShingle | Data Descriptor Zuo, Xi-Nian Anderson, Jeffrey S Bellec, Pierre Birn, Rasmus M Biswal, Bharat B Blautzik, Janusch Breitner, John C.S Buckner, Randy L Calhoun, Vince D Castellanos, F. Xavier Chen, Antao Chen, Bing Chen, Jiangtao Chen, Xu Colcombe, Stanley J Courtney, William Craddock, R Cameron Di Martino, Adriana Dong, Hao-Ming Fu, Xiaolan Gong, Qiyong Gorgolewski, Krzysztof J Han, Ying He, Ye He, Yong Ho, Erica Holmes, Avram Hou, Xiao-Hui Huckins, Jeremy Jiang, Tianzi Jiang, Yi Kelley, William Kelly, Clare King, Margaret LaConte, Stephen M Lainhart, Janet E Lei, Xu Li, Hui-Jie Li, Kaiming Li, Kuncheng Lin, Qixiang Liu, Dongqiang Liu, Jia Liu, Xun Liu, Yijun Lu, Guangming Lu, Jie Luna, Beatriz Luo, Jing Lurie, Daniel Mao, Ying Margulies, Daniel S Mayer, Andrew R Meindl, Thomas Meyerand, Mary E Nan, Weizhi Nielsen, Jared A O’Connor, David Paulsen, David Prabhakaran, Vivek Qi, Zhigang Qiu, Jiang Shao, Chunhong Shehzad, Zarrar Tang, Weijun Villringer, Arno Wang, Huiling Wang, Kai Wei, Dongtao Wei, Gao-Xia Weng, Xu-Chu Wu, Xuehai Xu, Ting Yang, Ning Yang, Zhi Zang, Yu-Feng Zhang, Lei Zhang, Qinglin Zhang, Zhe Zhang, Zhiqiang Zhao, Ke Zhen, Zonglei Zhou, Yuan Zhu, Xing-Ting Milham, Michael P An open science resource for establishing reliability and reproducibility in functional connectomics |
title | An open science resource for establishing reliability and reproducibility in functional connectomics |
title_full | An open science resource for establishing reliability and reproducibility in functional connectomics |
title_fullStr | An open science resource for establishing reliability and reproducibility in functional connectomics |
title_full_unstemmed | An open science resource for establishing reliability and reproducibility in functional connectomics |
title_short | An open science resource for establishing reliability and reproducibility in functional connectomics |
title_sort | open science resource for establishing reliability and reproducibility in functional connectomics |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4421932/ https://www.ncbi.nlm.nih.gov/pubmed/25977800 http://dx.doi.org/10.1038/sdata.2014.49 |
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